HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:22.2 nTPM
HPA:22.2 nTPM
GTEx:14.1 nTPM
FANTOM5:4.1 Scaled Tags Per Million
Pig:18.9 nTPM
Mouse:31.1 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.2
Sample id Sample description nTPM
Hippocampus
nTPM: 21.5
1855 Male, age 76, left hemisphere 22.3
2148 Female, age 91, left hemisphere 21.8
2529 Female, age 94, left hemisphere 21.5
2621 Female, age 67, right hemisphere 21.2
1898 Male, age 80, left hemisphere 21.1
1911 Female, age 85, right hemisphere 21.1
Dentate gyrus
nTPM: 21.7
2530 Female, age 94, left hemisphere 22.5
2246 Female, age 85, both hemispheres 22.3
2531 Female, age 67, both hemispheres 22.1
1927 Female, age 91, both hemispheres 21.3
2010 Male, age 76, both hemispheres 21.2
2528 Male, age 74, both hemispheres 21.0
Entorhinal gyrus
nTPM: 21.7
2613 Female, age 94, left hemisphere 22.6
1787 Male, age 76, left hemisphere 22.2
2764 Male, age 80, right hemisphere 21.8
2686 Male, age 75, right hemisphere 21.5
2117 Female, age 91, right hemisphere 21.1
1938 Female, age 85, left hemisphere 20.7
Hippocampus, CA1
nTPM: 22.0
2749 Male, age 80, left hemisphere 25.2
2527 Male, age 74, both hemispheres 22.4
1873 Female, age 85, both hemispheres 21.5
2045 Male, age 76, both hemispheres 21.1
2082 Female, age 91, right hemisphere 19.9
Hippocampus, CA2
nTPM: 21.7
1963 Male, age 80, left hemisphere 24.1
1940 Female, age 85, left hemisphere 22.2
2437 Female, age 94, left hemisphere 22.2
2113 Female, age 91, right hemisphere 21.2
2249 Male, age 74, both hemispheres 20.4
1892 Male, age 76, both hemispheres 19.9
Hippocampus, CA3
nTPM: 21.8
2861 Female, age 67, both hemispheres 25.3
2137 Male, age 80, left hemisphere 24.2
2620 Female, age 94, left hemisphere 21.5
1891 Female, age 85, both hemispheres 20.5
1867 Male, age 76, both hemispheres 20.2
2436 Male, age 74, both hemispheres 18.9
Parahippocampal cortex
nTPM: 22.2
2692 Male, age 74, both hemispheres 24.0
2245 Female, age 91, both hemispheres 23.7
2622 Female, age 67, right hemisphere 23.6
1933 Female, age 85, both hemispheres 22.8
2693 Female, age 94, both hemispheres 21.9
2532 Female, age 72, left hemisphere 21.8
1990 Female, age 91, right hemisphere 21.6
1850 Male, age 80, both hemispheres 21.2
2018 Male, age 76, both hemispheres 20.9
2250 Female, age 67, right hemisphere 20.8
Perirhinal gyrus
nTPM: 21.3
2521 Female, age 94, right hemisphere 22.8
1794 Male, age 80, right hemisphere 21.3
1847 Female, age 91, left hemisphere 20.9
1841 Female, age 85, right hemisphere 20.8
2848 Male, age 76, right hemisphere 20.6
Subiculum
nTPM: 22.0
2438 Female, age 94, left hemisphere 24.0
2619 Male, age 74, both hemispheres 22.8
2042 Male, age 76, both hemispheres 22.3
1901 Male, age 80, both hemispheres 22.0
1977 Female, age 85, both hemispheres 20.3
2729 Female, age 91, right hemisphere 20.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.1
Samples: 197

Max nTPM: 22.2
Min nTPM: 7.3
Std nTPM: 2.6
Median nTPM: 13.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 22.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 21.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 21.2
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 20.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 19.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 19.6
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 19.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 19.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 19.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 19.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 19.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.1
FF:10169-103B7 60 years, female 4.1
FF:10153-102I9 76 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 21.7
Min nTPM: 15.1
Sample A Female 20.4
Sample B Female 18.3
Sample C Male 21.7
Sample D Male 15.1
Entorhinal cortex
nTPM: 13.3
Samples: 4

Max nTPM: 13.9
Min nTPM: 12.3
Sample A Female 13.2
Sample B Female 13.9
Sample C Male 13.7
Sample D Male 12.3
Subiculum
nTPM: 14.3
Samples: 4

Max nTPM: 14.9
Min nTPM: 13.7
Sample A Female 13.8
Sample B Female 14.9
Sample C Male 13.7
Sample D Male 14.8
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 19.1
Min nTPM: 14.5
Sample A Female 15.1
Sample B Female 14.5
Sample C Male 18.8
Sample D Male 19.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.7
Samples: 4

Max nTPM: 28.6
Min nTPM: 21.6
Sample A Male 24.7
Sample B Male 28.6
Sample C Female 27.8
Sample D Female 21.6
Hippocampal formation
nTPM: 31.1
Samples: 4

Max nTPM: 34.7
Min nTPM: 27.7
Sample A Male 27.7
Sample B Male 30.1
Sample C Female 34.7
Sample D Female 31.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
73584831 Antisense, RP_051206_01_C04, Mouse strain C57BL/6J (56 days, male) 3.7

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