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PTP4A2
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  • PTP4A2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:135.3 nTPM
FANTOM5:165.6 Scaled Tags Per Million
Pig:117.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003281Antibody CAB011204
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 135.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 135.3
Samples: 246

Max nTPM: 529.0
Min nTPM: 53.3
Std nTPM: 66.8
Median nTPM: 114.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 529.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 412.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 375.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 365.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 345.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 326.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 322.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 316.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 292.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 289.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 287.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 280.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 279.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 271.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 262.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 254.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 253.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 239.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 237.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 234.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 229.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 227.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 219.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 213.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 211.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 206.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 203.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 200.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 199.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 195.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 194.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 194.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 193.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 192.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 192.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 191.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 191.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 185.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 183.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 182.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 182.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 180.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 179.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 178.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 177.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 176.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 172.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 171.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 170.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 169.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 168.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 166.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 165.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 165.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 164.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 163.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 162.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 161.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 161.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 160.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 159.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 159.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 158.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 158.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 158.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 157.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 156.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 154.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 153.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 152.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 151.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 151.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 150.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 148.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 147.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 147.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 147.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 147.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 145.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 145.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 145.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 144.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 142.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 141.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 140.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 140.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 139.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 139.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 138.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 138.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 136.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 136.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 134.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 133.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 132.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 131.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 131.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 130.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 130.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 129.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 129.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 129.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 128.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 128.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 127.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 127.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 126.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 125.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 124.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 124.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 124.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 124.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 122.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 121.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 120.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 120.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 120.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 119.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 119.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 118.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 116.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 115.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 114.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 114.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 114.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 113.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 113.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 113.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 112.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 112.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 112.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 112.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 111.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 111.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 111.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 109.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 109.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 109.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 108.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 108.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 108.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 107.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 107.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 106.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 106.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 106.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 105.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 105.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 105.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 105.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 104.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 102.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 101.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 101.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 101.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 100.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 100.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 100.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 100.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 100.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 100.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 99.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 99.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 99.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 99.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 99.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 98.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 98.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 97.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 97.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 97.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 96.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 95.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 94.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 93.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 93.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 92.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 92.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 92.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 92.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 91.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 91.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 91.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 91.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 91.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 91.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 90.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 90.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 90.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 89.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 89.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 89.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 88.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 88.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 87.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 86.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 85.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 85.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 85.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 84.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 84.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 83.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 83.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 81.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 81.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 81.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 81.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 81.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 81.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 81.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 79.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 79.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 79.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 78.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 78.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 78.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 77.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 77.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 77.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 76.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 76.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 75.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 75.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 75.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 74.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 73.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 72.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 72.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 72.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 72.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 71.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 70.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 69.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 69.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 68.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 67.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 67.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 67.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 66.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 66.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 65.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 64.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 64.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 64.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 62.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 53.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 165.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 165.6
FF:10164-103B2 76 years, female 165.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 117.5
Pig sample Sample description nTPM
Caudate
nTPM: 117.6
Samples: 4

Max nTPM: 136.2
Min nTPM: 98.3
Sample A Female 136.2
Sample B Female 105.4
Sample C Male 130.3
Sample D Male 98.3

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