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CLDN5
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:142.7 nTPM
FANTOM5:75.9 Scaled Tags Per Million
Pig:12.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB002607
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 142.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 142.7
Samples: 246

Max nTPM: 786.8
Min nTPM: 14.8
Std nTPM: 111.1
Median nTPM: 108.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 786.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 655.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 601.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 514.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 472.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 451.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 442.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 413.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 411.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 406.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 405.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 402.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 378.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 366.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 363.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 349.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 334.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 328.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 311.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 300.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 275.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 270.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 266.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 266.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 265.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 260.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 254.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 252.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 250.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 248.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 246.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 242.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 241.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 237.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 236.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 236.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 235.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 232.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 225.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 225.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 223.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 223.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 222.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 213.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 210.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 204.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 203.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 202.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 201.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 199.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 197.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 195.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 192.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 191.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 189.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 188.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 187.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 187.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 184.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 184.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 181.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 181.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 180.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 179.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 178.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 178.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 175.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 174.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 173.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 171.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 169.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 163.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 163.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 161.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 161.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 157.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 155.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 154.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 153.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 152.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 150.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 150.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 147.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 146.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 146.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 145.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 144.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 143.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 142.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 142.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 141.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 140.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 139.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 138.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 136.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 132.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 131.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 130.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 127.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 127.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 126.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 126.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 126.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 125.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 123.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 123.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 122.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 120.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 120.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 119.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 119.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 118.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 117.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 116.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 115.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 112.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 112.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 112.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 110.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 110.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 109.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 109.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 108.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 107.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 106.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 106.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 106.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 104.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 104.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 103.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 103.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 103.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 102.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 101.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 100.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 99.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 99.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 97.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 96.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 95.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 94.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 94.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 93.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 91.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 91.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 90.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 90.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 89.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 89.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 88.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 87.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 87.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 87.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 86.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 86.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 85.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 84.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 83.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 83.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 83.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 83.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 81.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 81.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 81.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 79.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 79.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 79.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 79.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 78.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 78.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 77.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 76.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 75.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 75.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 74.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 72.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 72.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 72.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 71.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 71.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 70.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 70.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 70.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 70.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 69.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 69.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 69.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 69.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 68.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 68.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 68.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 68.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 67.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 67.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 67.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 66.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 66.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 65.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 63.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 63.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 62.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 61.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 61.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 60.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 60.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 60.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 59.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 59.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 59.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 58.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 57.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 56.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 54.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 53.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 52.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 52.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 50.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 50.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 50.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 50.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 50.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 49.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 49.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 48.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 48.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 47.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 46.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 44.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 43.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 43.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 42.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 42.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 40.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 38.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 37.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 37.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 36.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 34.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 30.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 28.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 24.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 22.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 22.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 21.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 14.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 75.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 75.9
FF:10164-103B2 76 years, female 75.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 12.9
Pig sample Sample description nTPM
Caudate
nTPM: 12.9
Samples: 4

Max nTPM: 14.8
Min nTPM: 9.6
Sample A Female 9.6
Sample B Female 14.8
Sample C Male 12.9
Sample D Male 14.2

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