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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:133.9 nTPM
FANTOM5:186.7 Scaled Tags Per Million
Pig:115.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA044133
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 133.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 133.9
Samples: 246

Max nTPM: 347.3
Min nTPM: 37.0
Std nTPM: 60.3
Median nTPM: 124.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 347.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 333.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 304.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 293.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 288.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 286.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 273.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 269.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 261.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 257.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 254.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 239.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 238.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 234.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 230.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 228.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 226.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 224.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 224.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 220.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 219.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 219.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 212.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 212.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 211.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 210.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 210.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 210.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 209.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 208.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 207.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 204.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 202.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 200.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 199.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 199.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 194.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 194.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 193.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 191.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 190.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 190.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 190.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 190.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 189.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 189.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 188.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 187.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 187.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 185.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 185.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 185.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 184.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 183.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 182.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 182.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 181.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 181.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 181.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 180.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 179.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 178.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 178.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 176.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 176.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 175.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 174.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 173.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 171.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 167.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 166.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 163.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 163.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 162.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 161.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 160.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 159.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 157.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 154.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 154.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 153.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 153.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 153.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 152.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 152.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 151.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 150.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 148.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 148.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 147.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 147.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 146.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 145.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 143.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 141.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 140.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 137.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 135.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 135.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 134.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 133.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 133.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 132.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 132.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 131.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 131.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 131.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 131.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 131.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 130.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 130.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 129.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 128.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 127.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 127.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 126.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 126.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 126.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 125.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 125.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 125.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 124.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 124.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 124.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 124.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 124.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 123.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 123.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 123.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 123.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 123.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 122.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 122.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 121.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 121.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 121.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 120.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 119.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 119.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 118.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 118.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 116.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 115.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 114.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 113.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 113.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 113.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 112.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 112.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 111.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 111.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 111.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 110.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 110.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 108.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 106.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 105.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 105.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 105.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 104.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 104.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 103.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 103.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 102.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 101.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 100.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 100.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 98.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 98.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 97.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 97.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 97.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 96.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 95.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 95.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 95.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 94.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 92.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 91.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 88.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 88.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 87.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 87.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 87.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 87.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 86.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 85.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 85.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 84.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 82.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 82.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 82.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 81.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 81.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 80.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 79.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 78.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 78.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 76.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 76.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 75.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 73.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 73.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 72.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 72.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 72.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 72.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 71.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 70.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 70.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 68.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 68.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 67.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 66.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 66.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 65.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 64.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 64.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 64.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 64.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 63.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 63.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 62.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 62.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 61.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 61.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 57.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 57.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 57.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 56.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 55.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 53.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 51.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 51.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 50.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 47.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 47.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 45.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 45.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 44.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 43.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 42.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 42.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 41.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 39.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 37.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 186.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 186.7
FF:10164-103B2 76 years, female 186.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 115.9
Pig sample Sample description nTPM
Caudate
nTPM: 115.9
Samples: 4

Max nTPM: 126.2
Min nTPM: 107.1
Sample A Female 107.1
Sample B Female 122.3
Sample C Male 126.2
Sample D Male 108.0

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