HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.3 nTPM
HPA:16.3 nTPM
GTEx:22.2 nTPM
FANTOM5:20.2 Scaled Tags Per Million
Pig:20.0 nTPM
Mouse:34.3 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043096Antibody HPA046739
Glial cells Not detectedHigh
Neuronal cells Not detectedMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.3
Sample id Sample description nTPM
Hippocampus
nTPM: 14.6
1898 Male, age 80, left hemisphere 17.1
2148 Female, age 91, left hemisphere 16.3
2621 Female, age 67, right hemisphere 15.3
1855 Male, age 76, left hemisphere 13.9
2529 Female, age 94, left hemisphere 13.2
1911 Female, age 85, right hemisphere 12.0
Dentate gyrus
nTPM: 16.3
2530 Female, age 94, left hemisphere 18.2
2531 Female, age 67, both hemispheres 17.7
2528 Male, age 74, both hemispheres 16.9
1927 Female, age 91, both hemispheres 16.0
2010 Male, age 76, both hemispheres 14.7
2246 Female, age 85, both hemispheres 14.4
Entorhinal gyrus
nTPM: 16.2
2613 Female, age 94, left hemisphere 19.6
2764 Male, age 80, right hemisphere 19.3
1787 Male, age 76, left hemisphere 14.9
2686 Male, age 75, right hemisphere 14.8
1938 Female, age 85, left hemisphere 14.5
2117 Female, age 91, right hemisphere 14.0
Hippocampus, CA1
nTPM: 15.4
2749 Male, age 80, left hemisphere 21.9
2527 Male, age 74, both hemispheres 16.3
1873 Female, age 85, both hemispheres 14.1
2045 Male, age 76, both hemispheres 12.5
2082 Female, age 91, right hemisphere 12.4
Hippocampus, CA2
nTPM: 16.2
1963 Male, age 80, left hemisphere 20.1
2437 Female, age 94, left hemisphere 17.8
2249 Male, age 74, both hemispheres 16.5
1892 Male, age 76, both hemispheres 14.7
2113 Female, age 91, right hemisphere 14.4
1940 Female, age 85, left hemisphere 13.9
Hippocampus, CA3
nTPM: 14.5
2861 Female, age 67, both hemispheres 17.2
2137 Male, age 80, left hemisphere 15.1
2620 Female, age 94, left hemisphere 15.0
2436 Male, age 74, both hemispheres 14.4
1891 Female, age 85, both hemispheres 13.0
1867 Male, age 76, both hemispheres 12.3
Parahippocampal cortex
nTPM: 15.6
2622 Female, age 67, right hemisphere 17.9
2245 Female, age 91, both hemispheres 17.8
2693 Female, age 94, both hemispheres 17.3
1990 Female, age 91, right hemisphere 17.1
2250 Female, age 67, right hemisphere 15.7
1933 Female, age 85, both hemispheres 15.2
2532 Female, age 72, left hemisphere 15.2
1850 Male, age 80, both hemispheres 14.1
2692 Male, age 74, both hemispheres 13.2
2018 Male, age 76, both hemispheres 12.3
Perirhinal gyrus
nTPM: 15.9
2521 Female, age 94, right hemisphere 18.2
1794 Male, age 80, right hemisphere 17.3
1847 Female, age 91, left hemisphere 16.1
1841 Female, age 85, right hemisphere 15.1
2848 Male, age 76, right hemisphere 13.0
Subiculum
nTPM: 14.0
2729 Female, age 91, right hemisphere 16.2
1977 Female, age 85, both hemispheres 15.8
2619 Male, age 74, both hemispheres 14.8
1901 Male, age 80, both hemispheres 13.6
2438 Female, age 94, left hemisphere 12.9
2042 Male, age 76, both hemispheres 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.2
Samples: 197

Max nTPM: 40.9
Min nTPM: 7.0
Std nTPM: 8.0
Median nTPM: 20.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 40.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 40.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 39.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 39.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 39.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 38.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 37.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 37.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 36.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 36.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.2
FF:10153-102I9 76 years, female 20.6
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.4
Samples: 4

Max nTPM: 22.9
Min nTPM: 12.9
Sample A Female 22.9
Sample B Female 17.4
Sample C Male 20.4
Sample D Male 12.9
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 22.4
Min nTPM: 15.8
Sample A Female 20.0
Sample B Female 22.4
Sample C Male 22.0
Sample D Male 15.8
Subiculum
nTPM: 16.0
Samples: 4

Max nTPM: 21.5
Min nTPM: 13.5
Sample A Female 21.5
Sample B Female 13.5
Sample C Male 14.9
Sample D Male 14.1
Ventral hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 23.1
Min nTPM: 11.6
Sample A Female 18.8
Sample B Female 11.6
Sample C Male 23.1
Sample D Male 18.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.7
Samples: 4

Max nTPM: 35.3
Min nTPM: 31.9
Sample A Male 35.2
Sample B Male 35.3
Sample C Female 32.5
Sample D Female 31.9
Hippocampal formation
nTPM: 34.3
Samples: 4

Max nTPM: 36.0
Min nTPM: 31.4
Sample A Male 36.0
Sample B Male 34.6
Sample C Female 35.0
Sample D Female 31.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
71723820 Antisense, RP_050921_01_A02, Mouse strain C57BL/6J (56 days, male) 0.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.