HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
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Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.7 nTPM
HPA:32.7 nTPM
GTEx:27.5 nTPM
FANTOM5:30.3 Scaled Tags Per Million
Pig:8.9 nTPM
Mouse:13.6 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067031
Glial cells Medium
Neuronal cells Medium

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.7
Sample id Sample description nTPM
Hippocampus
nTPM: 31.9
2529 Female, age 94, left hemisphere 33.2
2621 Female, age 67, right hemisphere 32.4
1911 Female, age 85, right hemisphere 32.0
2148 Female, age 91, left hemisphere 31.8
1855 Male, age 76, left hemisphere 31.5
1898 Male, age 80, left hemisphere 30.2
Dentate gyrus
nTPM: 32.1
2531 Female, age 67, both hemispheres 33.4
2530 Female, age 94, left hemisphere 33.0
2246 Female, age 85, both hemispheres 32.0
2010 Male, age 76, both hemispheres 31.6
1927 Female, age 91, both hemispheres 31.3
2528 Male, age 74, both hemispheres 31.0
Entorhinal gyrus
nTPM: 32.3
2686 Male, age 75, right hemisphere 33.2
2613 Female, age 94, left hemisphere 32.8
2117 Female, age 91, right hemisphere 32.6
1787 Male, age 76, left hemisphere 32.0
2764 Male, age 80, right hemisphere 32.0
1938 Female, age 85, left hemisphere 31.4
Hippocampus, CA1
nTPM: 31.6
2527 Male, age 74, both hemispheres 32.3
2045 Male, age 76, both hemispheres 32.0
1873 Female, age 85, both hemispheres 31.9
2082 Female, age 91, right hemisphere 31.7
2749 Male, age 80, left hemisphere 30.4
Hippocampus, CA2
nTPM: 31.7
2113 Female, age 91, right hemisphere 32.8
2437 Female, age 94, left hemisphere 32.5
1940 Female, age 85, left hemisphere 32.3
2249 Male, age 74, both hemispheres 31.5
1892 Male, age 76, both hemispheres 31.0
1963 Male, age 80, left hemisphere 30.3
Hippocampus, CA3
nTPM: 31.9
2620 Female, age 94, left hemisphere 32.6
2861 Female, age 67, both hemispheres 32.6
1891 Female, age 85, both hemispheres 32.5
2137 Male, age 80, left hemisphere 31.7
1867 Male, age 76, both hemispheres 31.0
2436 Male, age 74, both hemispheres 30.9
Parahippocampal cortex
nTPM: 32.1
2692 Male, age 74, both hemispheres 33.0
2622 Female, age 67, right hemisphere 32.8
2245 Female, age 91, both hemispheres 32.7
2532 Female, age 72, left hemisphere 32.4
2018 Male, age 76, both hemispheres 32.1
1850 Male, age 80, both hemispheres 32.0
1933 Female, age 85, both hemispheres 31.7
1990 Female, age 91, right hemisphere 31.7
2693 Female, age 94, both hemispheres 31.7
2250 Female, age 67, right hemisphere 30.8
Perirhinal gyrus
nTPM: 31.1
1841 Female, age 85, right hemisphere 31.6
2521 Female, age 94, right hemisphere 31.4
2848 Male, age 76, right hemisphere 31.2
1794 Male, age 80, right hemisphere 31.0
1847 Female, age 91, left hemisphere 30.4
Subiculum
nTPM: 32.7
2438 Female, age 94, left hemisphere 34.9
2042 Male, age 76, both hemispheres 32.8
1901 Male, age 80, both hemispheres 32.5
2729 Female, age 91, right hemisphere 32.4
2619 Male, age 74, both hemispheres 32.3
1977 Female, age 85, both hemispheres 31.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.5
Samples: 197

Max nTPM: 59.3
Min nTPM: 11.3
Std nTPM: 7.8
Median nTPM: 26.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 59.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 57.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 53.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 50.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 44.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 43.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 42.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 41.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 41.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 40.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 40.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.3
FF:10169-103B7 60 years, female 30.3
FF:10153-102I9 76 years, female 30.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.1
Sample A Female 10.6
Sample B Female 8.6
Sample C Male 8.5
Sample D Male 8.1
Entorhinal cortex
nTPM: 8.1
Samples: 4

Max nTPM: 9.1
Min nTPM: 7.3
Sample A Female 9.1
Sample B Female 7.8
Sample C Male 7.3
Sample D Male 8.3
Subiculum
nTPM: 7.7
Samples: 4

Max nTPM: 9.0
Min nTPM: 6.5
Sample A Female 9.0
Sample B Female 6.8
Sample C Male 6.5
Sample D Male 8.4
Ventral hippocampus
nTPM: 8.3
Samples: 4

Max nTPM: 9.3
Min nTPM: 7.3
Sample A Female 9.1
Sample B Female 7.4
Sample C Male 7.3
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.3
Samples: 4

Max nTPM: 14.7
Min nTPM: 11.4
Sample A Male 14.7
Sample B Male 14.2
Sample C Female 13.0
Sample D Female 11.4
Hippocampal formation
nTPM: 13.7
Samples: 4

Max nTPM: 14.5
Min nTPM: 12.8
Sample A Male 12.9
Sample B Male 14.5
Sample C Female 14.4
Sample D Female 12.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69444885 Antisense, RP_050414_04_G11, Mouse strain C57BL/6J (56 days, male) 1.3

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