COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Low
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.3 nTPM
HPA:0.5 nTPM
GTEx:11.3 nTPM
FANTOM5:14.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA020071
Endothelial cells High
Glandular cells Low
Peripheral nerve/ganglion High



COLON - HPA RNA-seqi
Average nTPM 0.5
overview
Male, age 54 		Colon sample 67
nTPM: 0.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 1.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 0.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 0.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 0.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 0
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 0
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 0
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 0
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 0
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 0
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 2.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 11.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 11.3
Samples: 373

Max nTPM: 91.4
Min nTPM: 1.5
Std nTPM: 11.1
Median nTPM: 7.8
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 91.4
GTEX-ZE9C-2126-SM-4WKGY 60-69 years, male 74.4
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 65.6
GTEX-1JJEA-2526-SM-CY8HJ 60-69 years, male 60.3
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 60.2
GTEX-1LG7Y-2226-SM-E9U5K 50-59 years, male 48.6
GTEX-1EMGI-2626-SM-7IGNR 60-69 years, male 48.3
GTEX-14DAQ-2926-SM-664MV 60-69 years, female 46.5
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 45.3
GTEX-1LSNL-1626-SM-E9TJY 50-59 years, male 45.2
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 41.1
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Colon - Transverse
Average nTPM: 10.8
Samples: 406

Max nTPM: 120.1
Min nTPM: 1.4
Std nTPM: 10.6
Median nTPM: 8.8
GTEX-14JIY-3326-SM-6871E 60-69 years, male 120.1
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 107.8
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 65.3
GTEX-1HKZK-2126-SM-A9SL3 40-49 years, male 62.5
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 59.1
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 48.9
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 44.4
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 39.9
GTEX-1IDJC-1326-SM-CL53H 50-59 years, male 35.4
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 34.8
GTEX-WH7G-1326-SM-4LVMS 40-49 years, male 34.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 14.5
FF:10014-101C5 62,83,84 years, mixed 14.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.