HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:46.1 nTPM
HPA:46.1 nTPM
GTEx:22.2 nTPM
FANTOM5:22.7 Scaled Tags Per Million
Pig:1.9 nTPM
Mouse:1.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023188
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.1
Sample id Sample description nTPM
Hippocampus
nTPM: 45.8
2529 Female, age 94, left hemisphere 48.2
2148 Female, age 91, left hemisphere 45.9
1855 Male, age 76, left hemisphere 45.7
1898 Male, age 80, left hemisphere 45.4
2621 Female, age 67, right hemisphere 44.9
1911 Female, age 85, right hemisphere 44.4
Dentate gyrus
nTPM: 45.0
2530 Female, age 94, left hemisphere 49.0
2528 Male, age 74, both hemispheres 44.8
2010 Male, age 76, both hemispheres 44.3
2531 Female, age 67, both hemispheres 44.2
1927 Female, age 91, both hemispheres 44.0
2246 Female, age 85, both hemispheres 43.7
Entorhinal gyrus
nTPM: 45.6
1938 Female, age 85, left hemisphere 47.6
2764 Male, age 80, right hemisphere 47.1
1787 Male, age 76, left hemisphere 46.2
2117 Female, age 91, right hemisphere 45.2
2686 Male, age 75, right hemisphere 43.7
2613 Female, age 94, left hemisphere 43.6
Hippocampus, CA1
nTPM: 43.6
2527 Male, age 74, both hemispheres 44.9
1873 Female, age 85, both hemispheres 44.3
2045 Male, age 76, both hemispheres 44.1
2082 Female, age 91, right hemisphere 43.4
2749 Male, age 80, left hemisphere 41.5
Hippocampus, CA2
nTPM: 45.8
2437 Female, age 94, left hemisphere 48.4
2249 Male, age 74, both hemispheres 46.1
1892 Male, age 76, both hemispheres 45.7
1940 Female, age 85, left hemisphere 45.1
2113 Female, age 91, right hemisphere 44.9
1963 Male, age 80, left hemisphere 44.6
Hippocampus, CA3
nTPM: 44.0
1891 Female, age 85, both hemispheres 46.4
1867 Male, age 76, both hemispheres 46.1
2620 Female, age 94, left hemisphere 44.0
2436 Male, age 74, both hemispheres 43.3
2137 Male, age 80, left hemisphere 42.8
2861 Female, age 67, both hemispheres 41.5
Parahippocampal cortex
nTPM: 44.9
1990 Female, age 91, right hemisphere 46.4
2692 Male, age 74, both hemispheres 46.0
2250 Female, age 67, right hemisphere 45.5
2245 Female, age 91, both hemispheres 45.0
1933 Female, age 85, both hemispheres 44.8
2532 Female, age 72, left hemisphere 44.7
1850 Male, age 80, both hemispheres 44.5
2018 Male, age 76, both hemispheres 44.5
2622 Female, age 67, right hemisphere 44.2
2693 Female, age 94, both hemispheres 43.7
Perirhinal gyrus
nTPM: 44.3
1847 Female, age 91, left hemisphere 45.4
2521 Female, age 94, right hemisphere 44.6
1794 Male, age 80, right hemisphere 44.5
1841 Female, age 85, right hemisphere 43.5
2848 Male, age 76, right hemisphere 43.3
Subiculum
nTPM: 46.1
2042 Male, age 76, both hemispheres 47.7
2438 Female, age 94, left hemisphere 47.7
2729 Female, age 91, right hemisphere 46.3
1977 Female, age 85, both hemispheres 46.2
1901 Male, age 80, both hemispheres 44.6
2619 Male, age 74, both hemispheres 44.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.2
Samples: 197

Max nTPM: 61.6
Min nTPM: 5.7
Std nTPM: 9.7
Median nTPM: 20.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 61.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 51.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 49.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 49.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 49.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 47.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 46.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 44.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 41.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 41.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 40.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.7
FF:10153-102I9 76 years, female 27.7
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1.7
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.3
Sample A Female 2.4
Sample B Female 1.4
Sample C Male 1.6
Sample D Male 1.3
Entorhinal cortex
nTPM: 1.5
Samples: 4

Max nTPM: 1.6
Min nTPM: 1.4
Sample A Female 1.4
Sample B Female 1.6
Sample C Male 1.6
Sample D Male 1.4
Subiculum
nTPM: 1.5
Samples: 4

Max nTPM: 1.6
Min nTPM: 1.4
Sample A Female 1.5
Sample B Female 1.4
Sample C Male 1.6
Sample D Male 1.5
Ventral hippocampus
nTPM: 1.9
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.5
Sample A Female 1.5
Sample B Female 1.6
Sample C Male 2.4
Sample D Male 2.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.6
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.1
Sample A Male 2.6
Sample B Male 1.1
Sample C Female 1.3
Sample D Female 1.4
Hippocampal formation
nTPM: 1.9
Samples: 4

Max nTPM: 3.4
Min nTPM: 1.0
Sample A Male 1.6
Sample B Male 1.7
Sample C Female 1.0
Sample D Female 3.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
79541442 Antisense, RP_071018_01_E03, Mouse strain C57BL/6J (56 days, male) 0.0

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