HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.5 nTPM
HPA:32.5 nTPM
GTEx:30.8 nTPM
FANTOM5:112.9 Scaled Tags Per Million
Pig:18.6 nTPM
Mouse:24.1 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023046
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.5
Sample id Sample description nTPM
Hippocampus
nTPM: 32.5
2621 Female, age 67, right hemisphere 42.1
2529 Female, age 94, left hemisphere 33.6
2148 Female, age 91, left hemisphere 32.6
1855 Male, age 76, left hemisphere 29.3
1911 Female, age 85, right hemisphere 28.9
1898 Male, age 80, left hemisphere 28.5
Dentate gyrus
nTPM: 31.3
2530 Female, age 94, left hemisphere 39.7
2531 Female, age 67, both hemispheres 34.0
2246 Female, age 85, both hemispheres 32.2
2010 Male, age 76, both hemispheres 30.2
2528 Male, age 74, both hemispheres 27.8
1927 Female, age 91, both hemispheres 23.8
Entorhinal gyrus
nTPM: 31.3
2613 Female, age 94, left hemisphere 39.4
1787 Male, age 76, left hemisphere 33.5
2117 Female, age 91, right hemisphere 31.7
2764 Male, age 80, right hemisphere 29.5
2686 Male, age 75, right hemisphere 28.6
1938 Female, age 85, left hemisphere 25.4
Hippocampus, CA1
nTPM: 27.9
2045 Male, age 76, both hemispheres 31.2
2527 Male, age 74, both hemispheres 29.1
1873 Female, age 85, both hemispheres 27.9
2082 Female, age 91, right hemisphere 26.2
2749 Male, age 80, left hemisphere 25.1
Hippocampus, CA2
nTPM: 27.9
2437 Female, age 94, left hemisphere 34.3
1940 Female, age 85, left hemisphere 28.7
2113 Female, age 91, right hemisphere 28.6
2249 Male, age 74, both hemispheres 26.3
1963 Male, age 80, left hemisphere 25.6
1892 Male, age 76, both hemispheres 24.1
Hippocampus, CA3
nTPM: 31.6
2861 Female, age 67, both hemispheres 38.4
2620 Female, age 94, left hemisphere 33.9
1891 Female, age 85, both hemispheres 31.3
2436 Male, age 74, both hemispheres 31.3
1867 Male, age 76, both hemispheres 27.4
2137 Male, age 80, left hemisphere 27.3
Parahippocampal cortex
nTPM: 32.5
2622 Female, age 67, right hemisphere 40.3
2532 Female, age 72, left hemisphere 39.9
2245 Female, age 91, both hemispheres 37.8
2018 Male, age 76, both hemispheres 34.7
2692 Male, age 74, both hemispheres 32.7
2250 Female, age 67, right hemisphere 32.0
2693 Female, age 94, both hemispheres 29.5
1990 Female, age 91, right hemisphere 29.4
1933 Female, age 85, both hemispheres 24.8
1850 Male, age 80, both hemispheres 24.3
Perirhinal gyrus
nTPM: 27.0
2848 Male, age 76, right hemisphere 28.9
1847 Female, age 91, left hemisphere 28.0
2521 Female, age 94, right hemisphere 27.7
1841 Female, age 85, right hemisphere 26.1
1794 Male, age 80, right hemisphere 24.5
Subiculum
nTPM: 31.8
2438 Female, age 94, left hemisphere 38.0
2042 Male, age 76, both hemispheres 37.7
2619 Male, age 74, both hemispheres 34.2
1901 Male, age 80, both hemispheres 28.7
2729 Female, age 91, right hemisphere 27.1
1977 Female, age 85, both hemispheres 25.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.8
Samples: 197

Max nTPM: 121.3
Min nTPM: 12.0
Std nTPM: 13.3
Median nTPM: 28.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 121.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 95.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 75.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 71.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 65.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 64.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 60.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 59.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 59.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 57.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 54.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 112.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 112.9
FF:10169-103B7 60 years, female 133.9
FF:10153-102I9 76 years, female 92.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 24.1
Min nTPM: 12.9
Sample A Female 24.1
Sample B Female 15.1
Sample C Male 22.5
Sample D Male 12.9
Entorhinal cortex
nTPM: 16.0
Samples: 4

Max nTPM: 17.1
Min nTPM: 14.4
Sample A Female 16.0
Sample B Female 14.4
Sample C Male 17.1
Sample D Male 16.6
Subiculum
nTPM: 16.9
Samples: 4

Max nTPM: 23.7
Min nTPM: 14.3
Sample A Female 23.7
Sample B Female 14.4
Sample C Male 14.3
Sample D Male 15.0
Ventral hippocampus
nTPM: 17.2
Samples: 4

Max nTPM: 19.9
Min nTPM: 11.8
Sample A Female 18.1
Sample B Female 11.8
Sample C Male 19.9
Sample D Male 18.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.8
Samples: 4

Max nTPM: 20.5
Min nTPM: 16.8
Sample A Male 20.1
Sample B Male 20.5
Sample C Female 17.9
Sample D Female 16.8
Hippocampal formation
nTPM: 24.1
Samples: 4

Max nTPM: 25.3
Min nTPM: 22.1
Sample A Male 22.1
Sample B Male 24.5
Sample C Female 24.6
Sample D Female 25.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
69352908 Antisense, RP_050412_01_D04, Mouse strain C57BL/6J (56 days, male) 3.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.