HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.4 nTPM
HPA:45.4 nTPM
GTEx:43.0 nTPM
FANTOM5:31.0 Scaled Tags Per Million
Pig:28.1 nTPM
Mouse:17.3 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019858
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.4
Sample id Sample description nTPM
Hippocampus
nTPM: 45.2
2529 Female, age 94, left hemisphere 47.6
1898 Male, age 80, left hemisphere 46.6
2148 Female, age 91, left hemisphere 46.5
2621 Female, age 67, right hemisphere 46.3
1911 Female, age 85, right hemisphere 42.2
1855 Male, age 76, left hemisphere 41.8
Dentate gyrus
nTPM: 41.3
2530 Female, age 94, left hemisphere 44.6
2531 Female, age 67, both hemispheres 44.4
1927 Female, age 91, both hemispheres 40.6
2528 Male, age 74, both hemispheres 40.5
2246 Female, age 85, both hemispheres 39.7
2010 Male, age 76, both hemispheres 38.2
Entorhinal gyrus
nTPM: 41.9
2613 Female, age 94, left hemisphere 44.5
2764 Male, age 80, right hemisphere 43.5
2686 Male, age 75, right hemisphere 42.7
1787 Male, age 76, left hemisphere 42.3
1938 Female, age 85, left hemisphere 40.7
2117 Female, age 91, right hemisphere 37.7
Hippocampus, CA1
nTPM: 41.3
2749 Male, age 80, left hemisphere 49.7
1873 Female, age 85, both hemispheres 41.9
2527 Male, age 74, both hemispheres 40.5
2082 Female, age 91, right hemisphere 39.4
2045 Male, age 76, both hemispheres 35.1
Hippocampus, CA2
nTPM: 40.8
2437 Female, age 94, left hemisphere 43.5
1963 Male, age 80, left hemisphere 43.3
1892 Male, age 76, both hemispheres 41.0
2113 Female, age 91, right hemisphere 40.7
1940 Female, age 85, left hemisphere 40.0
2249 Male, age 74, both hemispheres 36.3
Hippocampus, CA3
nTPM: 45.4
2861 Female, age 67, both hemispheres 59.7
2137 Male, age 80, left hemisphere 48.6
2620 Female, age 94, left hemisphere 47.5
1867 Male, age 76, both hemispheres 41.0
1891 Female, age 85, both hemispheres 37.8
2436 Male, age 74, both hemispheres 37.6
Parahippocampal cortex
nTPM: 40.5
2622 Female, age 67, right hemisphere 49.2
2245 Female, age 91, both hemispheres 45.4
2692 Male, age 74, both hemispheres 42.7
1933 Female, age 85, both hemispheres 40.6
2532 Female, age 72, left hemisphere 40.1
1990 Female, age 91, right hemisphere 37.8
1850 Male, age 80, both hemispheres 37.6
2250 Female, age 67, right hemisphere 37.6
2018 Male, age 76, both hemispheres 36.8
2693 Female, age 94, both hemispheres 36.8
Perirhinal gyrus
nTPM: 38.4
1794 Male, age 80, right hemisphere 41.7
1847 Female, age 91, left hemisphere 40.0
1841 Female, age 85, right hemisphere 37.1
2848 Male, age 76, right hemisphere 36.7
2521 Female, age 94, right hemisphere 36.3
Subiculum
nTPM: 39.7
2619 Male, age 74, both hemispheres 42.9
2438 Female, age 94, left hemisphere 41.3
2729 Female, age 91, right hemisphere 40.7
1901 Male, age 80, both hemispheres 39.4
1977 Female, age 85, both hemispheres 37.7
2042 Male, age 76, both hemispheres 36.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.0
Samples: 197

Max nTPM: 162.1
Min nTPM: 14.3
Std nTPM: 16.3
Median nTPM: 40.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 162.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 93.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 92.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 92.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 87.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 81.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 72.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 72.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 71.5
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 67.3
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 66.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.0
FF:10153-102I9 76 years, female 41.2
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 29.1
Min nTPM: 19.2
Sample A Female 29.1
Sample B Female 20.6
Sample C Male 24.6
Sample D Male 19.2
Entorhinal cortex
nTPM: 28.1
Samples: 4

Max nTPM: 32.8
Min nTPM: 26.0
Sample A Female 27.4
Sample B Female 26.2
Sample C Male 32.8
Sample D Male 26.0
Subiculum
nTPM: 23.7
Samples: 4

Max nTPM: 29.7
Min nTPM: 20.8
Sample A Female 29.7
Sample B Female 20.8
Sample C Male 22.6
Sample D Male 21.7
Ventral hippocampus
nTPM: 24.0
Samples: 4

Max nTPM: 31.8
Min nTPM: 16.3
Sample A Female 24.1
Sample B Female 16.3
Sample C Male 31.8
Sample D Male 23.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 19.4
Min nTPM: 15.6
Sample A Male 18.0
Sample B Male 16.3
Sample C Female 15.6
Sample D Female 19.4
Hippocampal formation
nTPM: 16.4
Samples: 4

Max nTPM: 18.6
Min nTPM: 14.4
Sample A Male 14.7
Sample B Male 17.9
Sample C Female 14.4
Sample D Female 18.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
74509597 Antisense, RP_060208_01_A11, Mouse strain C57BL/6J (56 days, male) 1.5

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