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PRKN
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  • PRKN
PROTEIN STRUCTURE
ANTIBODIES
AND
VALIDATION
Protein structures
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PRKN
Synonyms AR-JP, PARK2, parkin, PDJ
Gene descriptioni

Full gene name according to HGNC.

Parkin RBR E3 ubiquitin protein ligase
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Read more
Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Read more
Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 6
Cytoband q26
Chromosome location (bp) 161347417 - 162727775
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

10
Ensembl ENSG00000185345 (version 103.38)
Entrez gene 5071
HGNC HGNC:8607
UniProt O60260 (UniProt - Evidence at protein level)
neXtProt NX_O60260
Antibodypedia PRKN antibodies


PROTEIN STRUCTUREi

The Structure section provides predicted structures from the Alphafold protein structure database and available experimental structures from Protein Data Bank (PDB).

In the Structure drop-down menu all experimental structures from PDB are available for selection and display. The structures are displayed using the NGL Viewer and can be zoomed-in and rotated either manually or by checking the Autorotate box. The Color scheme can be selected to show the residue index, chain name or confidence score (as B-factors and pLDDT score for experimental and predicted structures, respectively). The positions for available antigen sequences in the structure are shown if Antigens is turned to ON, and the Variants slider can be used to show the positions of clinical and population variants.https://github.com/nglviewer/ngl

Read more

Predicted


Description: Structure prediction from Alphafold project. Structure version 2

# Chains: 1      # Clinical variants: 22      # Population variants: 0

Antigens:

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On

Variants:

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Clinical
Population

Color scheme:

Confidence
Residue index
Chain name

Autorotate:

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PROTEIN BROWSERi

The protein browser displays the antigen location on the target protein(s) and the features of the target protein. The tabs at the top of the protein view section can be used to switch between the different splice variants to which an antigen has been mapped.

At the top of the view, the position of the antigen (identified by the corresponding HPA identifier) is shown as a green bar. A yellow triangle on the bar indicates a <100% sequence identity to the protein target.

Below the antigens, the maximum percent sequence identity of the protein to all other proteins from other human genes is displayed, using a sliding window of 10 aa residues (HsID 10) or 50 aa residues (HsID 50). The region with the lowest possible identity is always selected for antigen design, with a maximum identity of 60% allowed for designing a single-target antigen (read more).

The curve in blue displays the predicted antigenicity i.e. the tendency for different regions of the protein to generate an immune response, with peak regions being predicted to be more antigenic.The curve shows average values based on a sliding window approach using an in-house propensity scale. (read more).

If a signal peptide is predicted by a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius (turquoise) and/or transmembrane regions (orange) are predicted by MDM, these are displayed.

Low complexity regions are shown in yellow and InterPro regions in green. Common (purple) and unique (grey) regions between different splice variants of the gene are also displayed (read more), and at the bottom of the protein view is the protein scale.
PRKN-202
PRKN-204
PRKN-205
PRKN-206
PRKN-208
PRKN-209
PRKN-210
PRKN-211
PRKN-213
PRKN-220


PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant UniProt Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PRKN-202
ENSP00000355858
ENST00000366892
B1AKC3 [Direct mapping]
E3 ubiquitin-protein ligase parkin; Parkinson protein 2 E3 ubiquitin protein ligase isoform 2
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Show all
GO:0004842 [ubiquitin-protein transferase activity]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005829 [cytosol]
GO:0016567 [protein ubiquitination]
GO:0016740 [transferase activity]
GO:0016874 [ligase activity]
GO:0046872 [metal ion binding]
Show all
368 aa
40.5 kDa
No 0
PRKN-204
ENSP00000355862
ENST00000366896
O60260 [Direct mapping]
E3 ubiquitin-protein ligase parkin
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0000151 [ubiquitin ligase complex]
GO:0000209 [protein polyubiquitination]
GO:0000266 [mitochondrial fission]
GO:0000422 [autophagy of mitochondrion]
GO:0000423 [mitophagy]
GO:0001664 [G protein-coupled receptor binding]
GO:0001933 [negative regulation of protein phosphorylation]
GO:0003714 [transcription corepressor activity]
GO:0003779 [actin binding]
GO:0004842 [ubiquitin-protein transferase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005783 [endoplasmic reticulum]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0006513 [protein monoubiquitination]
GO:0006914 [autophagy]
GO:0006979 [response to oxidative stress]
GO:0007005 [mitochondrion organization]
GO:0007417 [central nervous system development]
GO:0008013 [beta-catenin binding]
GO:0008270 [zinc ion binding]
GO:0008344 [adult locomotory behavior]
GO:0010498 [proteasomal protein catabolic process]
GO:0010506 [regulation of autophagy]
GO:0010628 [positive regulation of gene expression]
GO:0010629 [negative regulation of gene expression]
GO:0010636 [positive regulation of mitochondrial fusion]
GO:0010637 [negative regulation of mitochondrial fusion]
GO:0010821 [regulation of mitochondrion organization]
GO:0010906 [regulation of glucose metabolic process]
GO:0010994 [free ubiquitin chain polymerization]
GO:0014059 [regulation of dopamine secretion]
GO:0015631 [tubulin binding]
GO:0016235 [aggresome]
GO:0016236 [macroautophagy]
GO:0016567 [protein ubiquitination]
GO:0016579 [protein deubiquitination]
GO:0016607 [nuclear speck]
GO:0016740 [transferase activity]
GO:0017124 [SH3 domain binding]
GO:0019899 [enzyme binding]
GO:0019900 [kinase binding]
GO:0019901 [protein kinase binding]
GO:0030165 [PDZ domain binding]
GO:0030544 [Hsp70 protein binding]
GO:0031072 [heat shock protein binding]
GO:0031396 [regulation of protein ubiquitination]
GO:0031624 [ubiquitin conjugating enzyme binding]
GO:0031625 [ubiquitin protein ligase binding]
GO:0031647 [regulation of protein stability]
GO:0031648 [protein destabilization]
GO:0032092 [positive regulation of protein binding]
GO:0032232 [negative regulation of actin filament bundle assembly]
GO:0032368 [regulation of lipid transport]
GO:0032436 [positive regulation of proteasomal ubiquitin-dependent protein catabolic process]
GO:0033132 [negative regulation of glucokinase activity]
GO:0034620 [cellular response to unfolded protein]
GO:0034976 [response to endoplasmic reticulum stress]
GO:0035519 [protein K29-linked ubiquitination]
GO:0036503 [ERAD pathway]
GO:0042053 [regulation of dopamine metabolic process]
GO:0042417 [dopamine metabolic process]
GO:0042802 [identical protein binding]
GO:0042826 [histone deacetylase binding]
GO:0042981 [regulation of apoptotic process]
GO:0043005 [neuron projection]
GO:0043123 [positive regulation of I-kappaB kinase/NF-kappaB signaling]
GO:0043130 [ubiquitin binding]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0043274 [phospholipase binding]
GO:0043388 [positive regulation of DNA binding]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0044257 [cellular protein catabolic process]
GO:0044267 [cellular protein metabolic process]
GO:0044314 [protein K27-linked ubiquitination]
GO:0044828 [negative regulation by host of viral genome replication]
GO:0044877 [protein-containing complex binding]
GO:0045202 [synapse]
GO:0045732 [positive regulation of protein catabolic process]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046329 [negative regulation of JNK cascade]
GO:0046676 [negative regulation of insulin secretion]
GO:0046872 [metal ion binding]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050821 [protein stabilization]
GO:0051087 [chaperone binding]
GO:0051582 [positive regulation of neurotransmitter uptake]
GO:0051865 [protein autoubiquitination]
GO:0055069 [zinc ion homeostasis]
GO:0060548 [negative regulation of cell death]
GO:0060828 [regulation of canonical Wnt signaling pathway]
GO:0061630 [ubiquitin protein ligase activity]
GO:0061734 [parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization]
GO:0070050 [neuron cellular homeostasis]
GO:0070534 [protein K63-linked ubiquitination]
GO:0070842 [aggresome assembly]
GO:0070936 [protein K48-linked ubiquitination]
GO:0070979 [protein K11-linked ubiquitination]
GO:0071287 [cellular response to manganese ion]
GO:0085020 [protein K6-linked ubiquitination]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
GO:0090141 [positive regulation of mitochondrial fission]
GO:0090201 [negative regulation of release of cytochrome c from mitochondria]
GO:0097237 [cellular response to toxic substance]
GO:0097413 [Lewy body]
GO:0097602 [cullin family protein binding]
GO:0098779 [positive regulation of mitophagy in response to mitochondrial depolarization]
GO:0098793 [presynapse]
GO:0099073 [mitochondrion-derived vesicle]
GO:0099074 [mitochondrion to lysosome transport]
GO:1900407 [regulation of cellular response to oxidative stress]
GO:1901215 [negative regulation of neuron death]
GO:1901800 [positive regulation of proteasomal protein catabolic process]
GO:1902236 [negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway]
GO:1902254 [negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator]
GO:1902283 [negative regulation of primary amine oxidase activity]
GO:1902530 [positive regulation of protein linear polyubiquitination]
GO:1902803 [regulation of synaptic vesicle transport]
GO:1903202 [negative regulation of oxidative stress-induced cell death]
GO:1903214 [regulation of protein targeting to mitochondrion]
GO:1903265 [positive regulation of tumor necrosis factor-mediated signaling pathway]
GO:1903351 [cellular response to dopamine]
GO:1903377 [negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway]
GO:1903542 [negative regulation of exosomal secretion]
GO:1903599 [positive regulation of autophagy of mitochondrion]
GO:1904049 [negative regulation of spontaneous neurotransmitter secretion]
GO:1905281 [positive regulation of retrograde transport, endosome to Golgi]
GO:1905366 [negative regulation of intralumenal vesicle formation]
GO:1905477 [positive regulation of protein localization to membrane]
GO:1990381 [ubiquitin-specific protease binding]
GO:1990444 [F-box domain binding]
GO:1990452 [Parkin-FBXW7-Cul1 ubiquitin ligase complex]
GO:2000377 [regulation of reactive oxygen species metabolic process]
GO:2000378 [negative regulation of reactive oxygen species metabolic process]
Show all
316 aa
35.6 kDa
No 0
PRKN-205
ENSP00000355863
ENST00000366897
O60260 [Direct mapping]
E3 ubiquitin-protein ligase parkin
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0000151 [ubiquitin ligase complex]
GO:0000209 [protein polyubiquitination]
GO:0000266 [mitochondrial fission]
GO:0000422 [autophagy of mitochondrion]
GO:0000423 [mitophagy]
GO:0001664 [G protein-coupled receptor binding]
GO:0001933 [negative regulation of protein phosphorylation]
GO:0003714 [transcription corepressor activity]
GO:0003779 [actin binding]
GO:0004842 [ubiquitin-protein transferase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005783 [endoplasmic reticulum]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0006513 [protein monoubiquitination]
GO:0006914 [autophagy]
GO:0006979 [response to oxidative stress]
GO:0007005 [mitochondrion organization]
GO:0007417 [central nervous system development]
GO:0008013 [beta-catenin binding]
GO:0008270 [zinc ion binding]
GO:0008344 [adult locomotory behavior]
GO:0010498 [proteasomal protein catabolic process]
GO:0010506 [regulation of autophagy]
GO:0010628 [positive regulation of gene expression]
GO:0010629 [negative regulation of gene expression]
GO:0010636 [positive regulation of mitochondrial fusion]
GO:0010637 [negative regulation of mitochondrial fusion]
GO:0010821 [regulation of mitochondrion organization]
GO:0010906 [regulation of glucose metabolic process]
GO:0010994 [free ubiquitin chain polymerization]
GO:0014059 [regulation of dopamine secretion]
GO:0015631 [tubulin binding]
GO:0016235 [aggresome]
GO:0016236 [macroautophagy]
GO:0016567 [protein ubiquitination]
GO:0016579 [protein deubiquitination]
GO:0016607 [nuclear speck]
GO:0016740 [transferase activity]
GO:0017124 [SH3 domain binding]
GO:0019899 [enzyme binding]
GO:0019900 [kinase binding]
GO:0019901 [protein kinase binding]
GO:0030165 [PDZ domain binding]
GO:0030544 [Hsp70 protein binding]
GO:0031072 [heat shock protein binding]
GO:0031396 [regulation of protein ubiquitination]
GO:0031624 [ubiquitin conjugating enzyme binding]
GO:0031625 [ubiquitin protein ligase binding]
GO:0031647 [regulation of protein stability]
GO:0031648 [protein destabilization]
GO:0032092 [positive regulation of protein binding]
GO:0032232 [negative regulation of actin filament bundle assembly]
GO:0032368 [regulation of lipid transport]
GO:0032436 [positive regulation of proteasomal ubiquitin-dependent protein catabolic process]
GO:0033132 [negative regulation of glucokinase activity]
GO:0034620 [cellular response to unfolded protein]
GO:0034976 [response to endoplasmic reticulum stress]
GO:0035519 [protein K29-linked ubiquitination]
GO:0036503 [ERAD pathway]
GO:0042053 [regulation of dopamine metabolic process]
GO:0042417 [dopamine metabolic process]
GO:0042802 [identical protein binding]
GO:0042826 [histone deacetylase binding]
GO:0042981 [regulation of apoptotic process]
GO:0043005 [neuron projection]
GO:0043123 [positive regulation of I-kappaB kinase/NF-kappaB signaling]
GO:0043130 [ubiquitin binding]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0043274 [phospholipase binding]
GO:0043388 [positive regulation of DNA binding]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0044257 [cellular protein catabolic process]
GO:0044267 [cellular protein metabolic process]
GO:0044314 [protein K27-linked ubiquitination]
GO:0044828 [negative regulation by host of viral genome replication]
GO:0044877 [protein-containing complex binding]
GO:0045202 [synapse]
GO:0045732 [positive regulation of protein catabolic process]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046329 [negative regulation of JNK cascade]
GO:0046676 [negative regulation of insulin secretion]
GO:0046872 [metal ion binding]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050821 [protein stabilization]
GO:0051087 [chaperone binding]
GO:0051582 [positive regulation of neurotransmitter uptake]
GO:0051865 [protein autoubiquitination]
GO:0055069 [zinc ion homeostasis]
GO:0060548 [negative regulation of cell death]
GO:0060828 [regulation of canonical Wnt signaling pathway]
GO:0061630 [ubiquitin protein ligase activity]
GO:0061734 [parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization]
GO:0070050 [neuron cellular homeostasis]
GO:0070534 [protein K63-linked ubiquitination]
GO:0070842 [aggresome assembly]
GO:0070936 [protein K48-linked ubiquitination]
GO:0070979 [protein K11-linked ubiquitination]
GO:0071287 [cellular response to manganese ion]
GO:0085020 [protein K6-linked ubiquitination]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
GO:0090141 [positive regulation of mitochondrial fission]
GO:0090201 [negative regulation of release of cytochrome c from mitochondria]
GO:0097237 [cellular response to toxic substance]
GO:0097413 [Lewy body]
GO:0097602 [cullin family protein binding]
GO:0098779 [positive regulation of mitophagy in response to mitochondrial depolarization]
GO:0098793 [presynapse]
GO:0099073 [mitochondrion-derived vesicle]
GO:0099074 [mitochondrion to lysosome transport]
GO:1900407 [regulation of cellular response to oxidative stress]
GO:1901215 [negative regulation of neuron death]
GO:1901800 [positive regulation of proteasomal protein catabolic process]
GO:1902236 [negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway]
GO:1902254 [negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator]
GO:1902283 [negative regulation of primary amine oxidase activity]
GO:1902530 [positive regulation of protein linear polyubiquitination]
GO:1902803 [regulation of synaptic vesicle transport]
GO:1903202 [negative regulation of oxidative stress-induced cell death]
GO:1903214 [regulation of protein targeting to mitochondrion]
GO:1903265 [positive regulation of tumor necrosis factor-mediated signaling pathway]
GO:1903351 [cellular response to dopamine]
GO:1903377 [negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway]
GO:1903542 [negative regulation of exosomal secretion]
GO:1903599 [positive regulation of autophagy of mitochondrion]
GO:1904049 [negative regulation of spontaneous neurotransmitter secretion]
GO:1905281 [positive regulation of retrograde transport, endosome to Golgi]
GO:1905366 [negative regulation of intralumenal vesicle formation]
GO:1905477 [positive regulation of protein localization to membrane]
GO:1990381 [ubiquitin-specific protease binding]
GO:1990444 [F-box domain binding]
GO:1990452 [Parkin-FBXW7-Cul1 ubiquitin ligase complex]
GO:2000377 [regulation of reactive oxygen species metabolic process]
GO:2000378 [negative regulation of reactive oxygen species metabolic process]
Show all
437 aa
48.7 kDa
No 0
PRKN-206
ENSP00000355865
ENST00000366898
O60260 [Direct mapping]
E3 ubiquitin-protein ligase parkin
X5DR79 [Target identity:100%; Query identity:100%]
RBR-type E3 ubiquitin transferase
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0000151 [ubiquitin ligase complex]
GO:0000209 [protein polyubiquitination]
GO:0000266 [mitochondrial fission]
GO:0000422 [autophagy of mitochondrion]
GO:0000423 [mitophagy]
GO:0001664 [G protein-coupled receptor binding]
GO:0001933 [negative regulation of protein phosphorylation]
GO:0001963 [synaptic transmission, dopaminergic]
GO:0001964 [startle response]
GO:0003714 [transcription corepressor activity]
GO:0003779 [actin binding]
GO:0004842 [ubiquitin-protein transferase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005783 [endoplasmic reticulum]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0006513 [protein monoubiquitination]
GO:0006914 [autophagy]
GO:0006979 [response to oxidative stress]
GO:0007005 [mitochondrion organization]
GO:0007417 [central nervous system development]
GO:0007612 [learning]
GO:0007626 [locomotory behavior]
GO:0008013 [beta-catenin binding]
GO:0008270 [zinc ion binding]
GO:0008344 [adult locomotory behavior]
GO:0010498 [proteasomal protein catabolic process]
GO:0010506 [regulation of autophagy]
GO:0010628 [positive regulation of gene expression]
GO:0010629 [negative regulation of gene expression]
GO:0010636 [positive regulation of mitochondrial fusion]
GO:0010637 [negative regulation of mitochondrial fusion]
GO:0010821 [regulation of mitochondrion organization]
GO:0010906 [regulation of glucose metabolic process]
GO:0010994 [free ubiquitin chain polymerization]
GO:0014059 [regulation of dopamine secretion]
GO:0015631 [tubulin binding]
GO:0016235 [aggresome]
GO:0016236 [macroautophagy]
GO:0016567 [protein ubiquitination]
GO:0016579 [protein deubiquitination]
GO:0016607 [nuclear speck]
GO:0016740 [transferase activity]
GO:0017124 [SH3 domain binding]
GO:0019538 [protein metabolic process]
GO:0019899 [enzyme binding]
GO:0019900 [kinase binding]
GO:0019901 [protein kinase binding]
GO:0030165 [PDZ domain binding]
GO:0030544 [Hsp70 protein binding]
GO:0031072 [heat shock protein binding]
GO:0031396 [regulation of protein ubiquitination]
GO:0031624 [ubiquitin conjugating enzyme binding]
GO:0031625 [ubiquitin protein ligase binding]
GO:0031647 [regulation of protein stability]
GO:0031648 [protein destabilization]
GO:0032092 [positive regulation of protein binding]
GO:0032232 [negative regulation of actin filament bundle assembly]
GO:0032368 [regulation of lipid transport]
GO:0032436 [positive regulation of proteasomal ubiquitin-dependent protein catabolic process]
GO:0032991 [protein-containing complex]
GO:0033132 [negative regulation of glucokinase activity]
GO:0034620 [cellular response to unfolded protein]
GO:0034976 [response to endoplasmic reticulum stress]
GO:0035249 [synaptic transmission, glutamatergic]
GO:0035519 [protein K29-linked ubiquitination]
GO:0036503 [ERAD pathway]
GO:0042053 [regulation of dopamine metabolic process]
GO:0042415 [norepinephrine metabolic process]
GO:0042417 [dopamine metabolic process]
GO:0042802 [identical protein binding]
GO:0042826 [histone deacetylase binding]
GO:0042981 [regulation of apoptotic process]
GO:0043005 [neuron projection]
GO:0043123 [positive regulation of I-kappaB kinase/NF-kappaB signaling]
GO:0043130 [ubiquitin binding]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0043274 [phospholipase binding]
GO:0043388 [positive regulation of DNA binding]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0044257 [cellular protein catabolic process]
GO:0044267 [cellular protein metabolic process]
GO:0044314 [protein K27-linked ubiquitination]
GO:0044828 [negative regulation by host of viral genome replication]
GO:0044877 [protein-containing complex binding]
GO:0045202 [synapse]
GO:0045732 [positive regulation of protein catabolic process]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046329 [negative regulation of JNK cascade]
GO:0046676 [negative regulation of insulin secretion]
GO:0046872 [metal ion binding]
GO:0046928 [regulation of neurotransmitter secretion]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050804 [modulation of chemical synaptic transmission]
GO:0050821 [protein stabilization]
GO:0051087 [chaperone binding]
GO:0051582 [positive regulation of neurotransmitter uptake]
GO:0051583 [dopamine uptake involved in synaptic transmission]
GO:0051865 [protein autoubiquitination]
GO:0051881 [regulation of mitochondrial membrane potential]
GO:0055069 [zinc ion homeostasis]
GO:0060548 [negative regulation of cell death]
GO:0060828 [regulation of canonical Wnt signaling pathway]
GO:0061630 [ubiquitin protein ligase activity]
GO:0061734 [parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization]
GO:0070050 [neuron cellular homeostasis]
GO:0070534 [protein K63-linked ubiquitination]
GO:0070585 [protein localization to mitochondrion]
GO:0070842 [aggresome assembly]
GO:0070936 [protein K48-linked ubiquitination]
GO:0070979 [protein K11-linked ubiquitination]
GO:0071287 [cellular response to manganese ion]
GO:0085020 [protein K6-linked ubiquitination]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
GO:0090141 [positive regulation of mitochondrial fission]
GO:0090201 [negative regulation of release of cytochrome c from mitochondria]
GO:0097237 [cellular response to toxic substance]
GO:0097413 [Lewy body]
GO:0097602 [cullin family protein binding]
GO:0098779 [positive regulation of mitophagy in response to mitochondrial depolarization]
GO:0098793 [presynapse]
GO:0099073 [mitochondrion-derived vesicle]
GO:0099074 [mitochondrion to lysosome transport]
GO:1900407 [regulation of cellular response to oxidative stress]
GO:1901215 [negative regulation of neuron death]
GO:1901800 [positive regulation of proteasomal protein catabolic process]
GO:1902236 [negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway]
GO:1902254 [negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator]
GO:1902283 [negative regulation of primary amine oxidase activity]
GO:1902530 [positive regulation of protein linear polyubiquitination]
GO:1902803 [regulation of synaptic vesicle transport]
GO:1903202 [negative regulation of oxidative stress-induced cell death]
GO:1903214 [regulation of protein targeting to mitochondrion]
GO:1903265 [positive regulation of tumor necrosis factor-mediated signaling pathway]
GO:1903351 [cellular response to dopamine]
GO:1903377 [negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway]
GO:1903382 [negative regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway]
GO:1903542 [negative regulation of exosomal secretion]
GO:1903599 [positive regulation of autophagy of mitochondrion]
GO:1903861 [positive regulation of dendrite extension]
GO:1904049 [negative regulation of spontaneous neurotransmitter secretion]
GO:1905281 [positive regulation of retrograde transport, endosome to Golgi]
GO:1905366 [negative regulation of intralumenal vesicle formation]
GO:1905477 [positive regulation of protein localization to membrane]
GO:1990381 [ubiquitin-specific protease binding]
GO:1990444 [F-box domain binding]
GO:1990452 [Parkin-FBXW7-Cul1 ubiquitin ligase complex]
GO:2000377 [regulation of reactive oxygen species metabolic process]
GO:2000378 [negative regulation of reactive oxygen species metabolic process]
Show all
465 aa
51.6 kDa
No 0
PRKN-208
ENSP00000483773
ENST00000610470
A0A087X0Z9 [Direct mapping]
RBR-type E3 ubiquitin transferase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Show all
GO:0004842 [ubiquitin-protein transferase activity]
GO:0005739 [mitochondrion]
GO:0005829 [cytosol]
GO:0016567 [protein ubiquitination]
GO:0016607 [nuclear speck]
GO:0016740 [transferase activity]
GO:0046872 [metal ion binding]
Show all
176 aa
19.7 kDa
No 0
PRKN-209
ENSP00000480716
ENST00000612485
A0A087WX46 [Direct mapping]
E3 ubiquitin-protein ligase parkin
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Show all
GO:0004842 [ubiquitin-protein transferase activity]
GO:0005739 [mitochondrion]
GO:0005829 [cytosol]
GO:0016567 [protein ubiquitination]
GO:0016607 [nuclear speck]
GO:0016740 [transferase activity]
GO:0046872 [metal ion binding]
Show all
74 aa
8 kDa
No 0
PRKN-210
ENSP00000478353
ENST00000612540
A0A087WU39 [Direct mapping]
E3 ubiquitin-protein ligase parkin
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Show all
201 aa
21.8 kDa
No 0
PRKN-211
ENSP00000484112
ENST00000615065
A0A087X1E2 [Direct mapping]
E3 ubiquitin-protein ligase parkin
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Show all
87 aa
9.2 kDa
No 0
PRKN-213
ENSP00000501337
ENST00000647006
A0A6I8PII0 [Direct mapping]
E3 ubiquitin-protein ligase parkin
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Show all
115 aa
13.4 kDa
No 0
PRKN-220
ENSP00000501354
ENST00000674250
A0A6I8PRS9 [Direct mapping]
E3 ubiquitin-protein ligase parkin
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Show all
63 aa
7.3 kDa
No 0

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The Human Protein Atlas project is funded
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