HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:43.7 nTPM
HPA:43.7 nTPM
GTEx:37.7 nTPM
FANTOM5:32.4 Scaled Tags Per Million
Pig:12.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody CAB003685
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.7
Sample id Sample description nTPM
Hippocampus
nTPM: 43.7
2529 Female, age 94, left hemisphere 51.3
1855 Male, age 76, left hemisphere 44.2
1898 Male, age 80, left hemisphere 43.4
2621 Female, age 67, right hemisphere 42.0
1911 Female, age 85, right hemisphere 41.1
2148 Female, age 91, left hemisphere 40.5
Dentate gyrus
nTPM: 40.5
2010 Male, age 76, both hemispheres 42.0
2530 Female, age 94, left hemisphere 42.0
2246 Female, age 85, both hemispheres 40.6
2531 Female, age 67, both hemispheres 40.3
1927 Female, age 91, both hemispheres 39.3
2528 Male, age 74, both hemispheres 39.0
Entorhinal gyrus
nTPM: 39.6
2686 Male, age 75, right hemisphere 41.4
1938 Female, age 85, left hemisphere 40.8
1787 Male, age 76, left hemisphere 39.9
2117 Female, age 91, right hemisphere 39.9
2764 Male, age 80, right hemisphere 39.0
2613 Female, age 94, left hemisphere 36.6
Hippocampus, CA1
nTPM: 43.5
2045 Male, age 76, both hemispheres 48.5
2749 Male, age 80, left hemisphere 44.7
2527 Male, age 74, both hemispheres 43.2
1873 Female, age 85, both hemispheres 42.1
2082 Female, age 91, right hemisphere 39.2
Hippocampus, CA2
nTPM: 40.7
1892 Male, age 76, both hemispheres 43.8
1963 Male, age 80, left hemisphere 42.9
1940 Female, age 85, left hemisphere 39.7
2437 Female, age 94, left hemisphere 39.6
2249 Male, age 74, both hemispheres 39.2
2113 Female, age 91, right hemisphere 39.0
Hippocampus, CA3
nTPM: 41.3
2620 Female, age 94, left hemisphere 46.2
1867 Male, age 76, both hemispheres 41.7
1891 Female, age 85, both hemispheres 41.0
2137 Male, age 80, left hemisphere 40.1
2861 Female, age 67, both hemispheres 39.5
2436 Male, age 74, both hemispheres 39.0
Parahippocampal cortex
nTPM: 39.9
2245 Female, age 91, both hemispheres 41.5
2692 Male, age 74, both hemispheres 41.4
2532 Female, age 72, left hemisphere 40.9
1933 Female, age 85, both hemispheres 40.7
1850 Male, age 80, both hemispheres 40.1
2622 Female, age 67, right hemisphere 39.8
2018 Male, age 76, both hemispheres 39.7
2250 Female, age 67, right hemisphere 39.3
1990 Female, age 91, right hemisphere 38.4
2693 Female, age 94, both hemispheres 37.2
Perirhinal gyrus
nTPM: 39.1
1841 Female, age 85, right hemisphere 40.3
1847 Female, age 91, left hemisphere 39.7
1794 Male, age 80, right hemisphere 39.3
2848 Male, age 76, right hemisphere 39.3
2521 Female, age 94, right hemisphere 37.2
Subiculum
nTPM: 40.9
2042 Male, age 76, both hemispheres 44.9
2438 Female, age 94, left hemisphere 42.4
1901 Male, age 80, both hemispheres 40.9
2729 Female, age 91, right hemisphere 39.8
2619 Male, age 74, both hemispheres 38.8
1977 Female, age 85, both hemispheres 38.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.7
Samples: 197

Max nTPM: 89.8
Min nTPM: 16.1
Std nTPM: 10.8
Median nTPM: 35.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 89.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 77.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 69.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 67.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 65.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 65.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 65.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 57.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 57.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 56.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 56.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.4
FF:10169-103B7 60 years, female 35.5
FF:10153-102I9 76 years, female 29.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.0
Samples: 4

Max nTPM: 16.3
Min nTPM: 10.0
Sample A Female 16.3
Sample B Female 11.7
Sample C Male 10.1
Sample D Male 10.0
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 11.8
Min nTPM: 9.1
Sample A Female 9.4
Sample B Female 11.8
Sample C Male 9.3
Sample D Male 9.1
Subiculum
nTPM: 9.5
Samples: 4

Max nTPM: 12.3
Min nTPM: 8.2
Sample A Female 12.3
Sample B Female 8.2
Sample C Male 8.7
Sample D Male 8.8
Ventral hippocampus
nTPM: 11.9
Samples: 4

Max nTPM: 13.1
Min nTPM: 8.7
Sample A Female 12.6
Sample B Female 8.7
Sample C Male 13.1
Sample D Male 13.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.