HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:8.5 nTPM
HPA:8.5 nTPM
GTEx:10.8 nTPM
FANTOM5:10.5 Scaled Tags Per Million
Pig:26.7 nTPM
Mouse:1.8 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031046
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.5
Sample id Sample description nTPM
Hippocampus
nTPM: 8.4
1855 Male, age 76, left hemisphere 9.5
2529 Female, age 94, left hemisphere 9.2
2621 Female, age 67, right hemisphere 9.0
2148 Female, age 91, left hemisphere 8.0
1898 Male, age 80, left hemisphere 7.8
1911 Female, age 85, right hemisphere 7.0
Dentate gyrus
nTPM: 7.4
2010 Male, age 76, both hemispheres 8.8
2246 Female, age 85, both hemispheres 8.4
2530 Female, age 94, left hemisphere 7.9
1927 Female, age 91, both hemispheres 7.1
2531 Female, age 67, both hemispheres 6.4
2528 Male, age 74, both hemispheres 5.7
Entorhinal gyrus
nTPM: 8.0
2764 Male, age 80, right hemisphere 8.6
1787 Male, age 76, left hemisphere 8.5
1938 Female, age 85, left hemisphere 8.5
2613 Female, age 94, left hemisphere 8.1
2686 Male, age 75, right hemisphere 7.9
2117 Female, age 91, right hemisphere 6.6
Hippocampus, CA1
nTPM: 7.5
2527 Male, age 74, both hemispheres 8.9
1873 Female, age 85, both hemispheres 8.3
2749 Male, age 80, left hemisphere 7.8
2045 Male, age 76, both hemispheres 6.9
2082 Female, age 91, right hemisphere 5.5
Hippocampus, CA2
nTPM: 6.7
2437 Female, age 94, left hemisphere 8.6
1892 Male, age 76, both hemispheres 7.1
2249 Male, age 74, both hemispheres 7.1
1963 Male, age 80, left hemisphere 6.6
2113 Female, age 91, right hemisphere 5.7
1940 Female, age 85, left hemisphere 5.3
Hippocampus, CA3
nTPM: 6.8
2861 Female, age 67, both hemispheres 10.6
1867 Male, age 76, both hemispheres 7.7
1891 Female, age 85, both hemispheres 6.7
2436 Male, age 74, both hemispheres 6.0
2620 Female, age 94, left hemisphere 5.2
2137 Male, age 80, left hemisphere 4.9
Parahippocampal cortex
nTPM: 8.5
2250 Female, age 67, right hemisphere 9.9
2622 Female, age 67, right hemisphere 9.9
1933 Female, age 85, both hemispheres 9.6
2018 Male, age 76, both hemispheres 9.1
2692 Male, age 74, both hemispheres 8.8
2245 Female, age 91, both hemispheres 8.3
2693 Female, age 94, both hemispheres 8.1
1990 Female, age 91, right hemisphere 8.0
2532 Female, age 72, left hemisphere 6.5
1850 Male, age 80, both hemispheres 6.4
Perirhinal gyrus
nTPM: 8.0
1847 Female, age 91, left hemisphere 9.3
1794 Male, age 80, right hemisphere 8.1
2521 Female, age 94, right hemisphere 8.1
1841 Female, age 85, right hemisphere 7.3
2848 Male, age 76, right hemisphere 7.0
Subiculum
nTPM: 8.2
2619 Male, age 74, both hemispheres 10.2
2438 Female, age 94, left hemisphere 9.3
1977 Female, age 85, both hemispheres 8.8
2042 Male, age 76, both hemispheres 8.4
2729 Female, age 91, right hemisphere 6.3
1901 Male, age 80, both hemispheres 6.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.8
Samples: 197

Max nTPM: 36.6
Min nTPM: 1.8
Std nTPM: 4.9
Median nTPM: 10.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 36.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 26.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.0
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 25.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 24.8
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 24.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 22.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 20.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 19.7
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 19.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 18.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.5
FF:10153-102I9 76 years, female 11.6
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.5
Samples: 4

Max nTPM: 24.3
Min nTPM: 13.0
Sample A Female 22.1
Sample B Female 22.5
Sample C Male 24.3
Sample D Male 13.0
Entorhinal cortex
nTPM: 25.0
Samples: 4

Max nTPM: 36.7
Min nTPM: 19.7
Sample A Female 19.7
Sample B Female 22.9
Sample C Male 36.7
Sample D Male 20.8
Subiculum
nTPM: 26.7
Samples: 4

Max nTPM: 38.3
Min nTPM: 17.2
Sample A Female 38.3
Sample B Female 25.5
Sample C Male 25.8
Sample D Male 17.2
Ventral hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 33.1
Min nTPM: 18.0
Sample A Female 20.9
Sample B Female 20.8
Sample C Male 33.1
Sample D Male 18.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.8
Samples: 4

Max nTPM: 2.8
Min nTPM: 1.2
Sample A Male 1.2
Sample B Male 1.2
Sample C Female 2.8
Sample D Female 2.1
Hippocampal formation
nTPM: 1.3
Samples: 4

Max nTPM: 1.3
Min nTPM: 1.1
Sample A Male 1.3
Sample B Male 1.1
Sample C Female 1.3
Sample D Female 1.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.