HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:98.7 nTPM
HPA:98.7 nTPM
GTEx:65.9 nTPM
FANTOM5:247.1 Scaled Tags Per Million
Pig:87.3 nTPM
Mouse:13.9 nTPM
Allen mouse:15.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001301
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 98.7
Sample id Sample description nTPM
Hippocampus
nTPM: 98.7
2529 Female, age 94, left hemisphere 114.1
1855 Male, age 76, left hemisphere 112.1
2148 Female, age 91, left hemisphere 93.8
1911 Female, age 85, right hemisphere 92.9
2621 Female, age 67, right hemisphere 90.8
1898 Male, age 80, left hemisphere 88.4
Dentate gyrus
nTPM: 93.0
2528 Male, age 74, both hemispheres 120.2
2010 Male, age 76, both hemispheres 113.0
2530 Female, age 94, left hemisphere 104.0
2531 Female, age 67, both hemispheres 80.4
2246 Female, age 85, both hemispheres 78.5
1927 Female, age 91, both hemispheres 61.6
Entorhinal gyrus
nTPM: 77.6
2117 Female, age 91, right hemisphere 120.9
1787 Male, age 76, left hemisphere 95.0
2764 Male, age 80, right hemisphere 65.4
1938 Female, age 85, left hemisphere 65.0
2686 Male, age 75, right hemisphere 64.1
2613 Female, age 94, left hemisphere 55.4
Hippocampus, CA1
nTPM: 85.3
2082 Female, age 91, right hemisphere 113.8
1873 Female, age 85, both hemispheres 93.7
2045 Male, age 76, both hemispheres 82.3
2527 Male, age 74, both hemispheres 81.3
2749 Male, age 80, left hemisphere 55.5
Hippocampus, CA2
nTPM: 96.6
2249 Male, age 74, both hemispheres 135.9
1940 Female, age 85, left hemisphere 123.8
2113 Female, age 91, right hemisphere 106.5
2437 Female, age 94, left hemisphere 88.8
1963 Male, age 80, left hemisphere 73.1
1892 Male, age 76, both hemispheres 51.3
Hippocampus, CA3
nTPM: 74.4
2436 Male, age 74, both hemispheres 90.3
2861 Female, age 67, both hemispheres 78.2
1891 Female, age 85, both hemispheres 76.2
2620 Female, age 94, left hemisphere 75.9
1867 Male, age 76, both hemispheres 63.6
2137 Male, age 80, left hemisphere 62.2
Parahippocampal cortex
nTPM: 69.5
2018 Male, age 76, both hemispheres 104.3
2250 Female, age 67, right hemisphere 92.8
2245 Female, age 91, both hemispheres 72.9
1990 Female, age 91, right hemisphere 68.3
2622 Female, age 67, right hemisphere 67.7
2692 Male, age 74, both hemispheres 66.9
2532 Female, age 72, left hemisphere 59.3
1933 Female, age 85, both hemispheres 56.4
2693 Female, age 94, both hemispheres 54.8
1850 Male, age 80, both hemispheres 52.3
Perirhinal gyrus
nTPM: 59.7
2521 Female, age 94, right hemisphere 63.4
1841 Female, age 85, right hemisphere 60.9
1794 Male, age 80, right hemisphere 58.6
1847 Female, age 91, left hemisphere 58.2
2848 Male, age 76, right hemisphere 57.6
Subiculum
nTPM: 85.4
2729 Female, age 91, right hemisphere 116.6
2619 Male, age 74, both hemispheres 98.4
2042 Male, age 76, both hemispheres 90.6
2438 Female, age 94, left hemisphere 76.9
1901 Male, age 80, both hemispheres 69.4
1977 Female, age 85, both hemispheres 60.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.9
Samples: 197

Max nTPM: 288.2
Min nTPM: 18.0
Std nTPM: 36.3
Median nTPM: 58.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 288.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 218.5
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 183.5
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 180.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 177.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 149.2
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 143.9
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 141.2
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 135.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 134.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 131.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 247.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 247.1
FF:10153-102I9 76 years, female 350.9
FF:10169-103B7 60 years, female 143.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 87.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 73.5
Samples: 4

Max nTPM: 93.2
Min nTPM: 50.4
Sample A Female 91.3
Sample B Female 58.9
Sample C Male 93.2
Sample D Male 50.4
Entorhinal cortex
nTPM: 57.8
Samples: 4

Max nTPM: 73.0
Min nTPM: 46.3
Sample A Female 73.0
Sample B Female 49.9
Sample C Male 62.0
Sample D Male 46.3
Subiculum
nTPM: 84.2
Samples: 4

Max nTPM: 100.8
Min nTPM: 74.8
Sample A Female 100.8
Sample B Female 74.9
Sample C Male 86.3
Sample D Male 74.8
Ventral hippocampus
nTPM: 87.3
Samples: 4

Max nTPM: 111.8
Min nTPM: 69.4
Sample A Female 90.1
Sample B Female 69.4
Sample C Male 111.8
Sample D Male 77.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.9
Samples: 4

Max nTPM: 16.3
Min nTPM: 12.9
Sample A Male 16.3
Sample B Male 12.9
Sample C Female 13.1
Sample D Female 13.1
Hippocampal formation
nTPM: 13.2
Samples: 4

Max nTPM: 15.3
Min nTPM: 12.0
Sample A Male 12.9
Sample B Male 12.5
Sample C Female 12.0
Sample D Female 15.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.1
70445341 Antisense, RP_050614_03_E09, Mouse strain C57BL/6J (56 days, male) 15.1

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