HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:30.0 nTPM
HPA:30.0 nTPM
GTEx:39.1 nTPM
FANTOM5:29.2 Scaled Tags Per Million
Pig:19.6 nTPM
Mouse:32.5 nTPM
Allen mouse:9.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068172Antibody HPA069843
Glial cells Not detectedMedium
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.0
Sample id Sample description nTPM
Hippocampus
nTPM: 27.2
2621 Female, age 67, right hemisphere 31.6
1911 Female, age 85, right hemisphere 31.1
2148 Female, age 91, left hemisphere 31.1
2529 Female, age 94, left hemisphere 28.5
1855 Male, age 76, left hemisphere 24.3
1898 Male, age 80, left hemisphere 16.9
Dentate gyrus
nTPM: 25.8
2531 Female, age 67, both hemispheres 37.0
1927 Female, age 91, both hemispheres 26.7
2246 Female, age 85, both hemispheres 25.7
2528 Male, age 74, both hemispheres 25.2
2530 Female, age 94, left hemisphere 21.7
2010 Male, age 76, both hemispheres 18.7
Entorhinal gyrus
nTPM: 26.3
2613 Female, age 94, left hemisphere 39.5
2686 Male, age 75, right hemisphere 30.5
2764 Male, age 80, right hemisphere 26.3
1787 Male, age 76, left hemisphere 22.5
1938 Female, age 85, left hemisphere 21.8
2117 Female, age 91, right hemisphere 17.0
Hippocampus, CA1
nTPM: 26.2
2749 Male, age 80, left hemisphere 29.5
2527 Male, age 74, both hemispheres 26.8
2082 Female, age 91, right hemisphere 26.3
2045 Male, age 76, both hemispheres 24.6
1873 Female, age 85, both hemispheres 23.9
Hippocampus, CA2
nTPM: 22.2
2113 Female, age 91, right hemisphere 25.8
2437 Female, age 94, left hemisphere 22.7
1940 Female, age 85, left hemisphere 22.6
2249 Male, age 74, both hemispheres 22.5
1963 Male, age 80, left hemisphere 20.7
1892 Male, age 76, both hemispheres 19.0
Hippocampus, CA3
nTPM: 30.0
2620 Female, age 94, left hemisphere 44.9
2861 Female, age 67, both hemispheres 40.2
2137 Male, age 80, left hemisphere 29.4
2436 Male, age 74, both hemispheres 23.3
1891 Female, age 85, both hemispheres 21.2
1867 Male, age 76, both hemispheres 21.1
Parahippocampal cortex
nTPM: 24.3
2622 Female, age 67, right hemisphere 34.6
2245 Female, age 91, both hemispheres 29.4
2692 Male, age 74, both hemispheres 27.5
2693 Female, age 94, both hemispheres 26.9
2018 Male, age 76, both hemispheres 23.1
2532 Female, age 72, left hemisphere 21.7
1933 Female, age 85, both hemispheres 21.6
2250 Female, age 67, right hemisphere 21.5
1990 Female, age 91, right hemisphere 21.2
1850 Male, age 80, both hemispheres 15.3
Perirhinal gyrus
nTPM: 20.0
2521 Female, age 94, right hemisphere 24.0
1847 Female, age 91, left hemisphere 21.2
2848 Male, age 76, right hemisphere 18.6
1841 Female, age 85, right hemisphere 18.4
1794 Male, age 80, right hemisphere 17.8
Subiculum
nTPM: 22.0
2729 Female, age 91, right hemisphere 27.3
2619 Male, age 74, both hemispheres 27.1
1901 Male, age 80, both hemispheres 22.3
1977 Female, age 85, both hemispheres 20.4
2042 Male, age 76, both hemispheres 18.0
2438 Female, age 94, left hemisphere 16.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.1
Samples: 197

Max nTPM: 106.9
Min nTPM: 15.0
Std nTPM: 12.7
Median nTPM: 38.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 106.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 73.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 69.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 66.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 66.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 65.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 64.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 63.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 62.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 62.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 62.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.2
FF:10153-102I9 76 years, female 35.3
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 26.2
Min nTPM: 13.9
Sample A Female 26.2
Sample B Female 19.7
Sample C Male 14.9
Sample D Male 13.9
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 23.7
Min nTPM: 12.4
Sample A Female 17.9
Sample B Female 20.1
Sample C Male 23.7
Sample D Male 12.4
Subiculum
nTPM: 18.9
Samples: 4

Max nTPM: 28.1
Min nTPM: 15.2
Sample A Female 28.1
Sample B Female 16.4
Sample C Male 15.2
Sample D Male 15.8
Ventral hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 24.2
Min nTPM: 15.2
Sample A Female 23.3
Sample B Female 15.8
Sample C Male 24.2
Sample D Male 15.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.5
Samples: 4

Max nTPM: 36.7
Min nTPM: 27.3
Sample A Male 32.7
Sample B Male 33.4
Sample C Female 27.3
Sample D Female 36.7
Hippocampal formation
nTPM: 30.9
Samples: 4

Max nTPM: 35.3
Min nTPM: 27.7
Sample A Male 30.4
Sample B Male 35.3
Sample C Female 27.7
Sample D Female 30.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.9
2151 Antisense, RP_040604_02_A04, Mouse strain C57BL/6J (56 days, male) 9.9
2152 Antisense, RP_040604_02_A04, Mouse strain C57BL/6J (56 days, male) 6.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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