COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.3 nTPM
HPA:8.9 nTPM
GTEx:40.3 nTPM
FANTOM5:13.8 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA068172Antibody HPA069843
Endothelial cells Not detectedNot detected
Glandular cells LowHigh
Peripheral nerve/ganglion LowNot detected




COLON - HPA RNA-seqi
Average nTPM 8.9
overview
Male, age 54 		Colon sample 67
nTPM: 10.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 9.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 9.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 11.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 9.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 12.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 5.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 4.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 10.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 7.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 7.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 10.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 40.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 40.3
Samples: 373

Max nTPM: 78.0
Min nTPM: 10.9
Std nTPM: 11.1
Median nTPM: 40.0
GTEX-1LG7Z-1326-SM-DIPF3 30-39 years, male 78.0
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 74.8
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 73.5
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 73.2
GTEX-1N2DV-1826-SM-E6CJ5 40-49 years, male 71.0
GTEX-WXYG-1726-SM-4ONCU 50-59 years, female 70.7
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 69.5
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 67.3
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 65.8
GTEX-1R7EU-1826-SM-DTX9L 60-69 years, male 65.5
GTEX-1GMR2-1826-SM-9KNUP 50-59 years, male 64.9
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Colon - Transverse
Average nTPM: 24.5
Samples: 406

Max nTPM: 64.1
Min nTPM: 8.5
Std nTPM: 11.3
Median nTPM: 21.6
GTEX-11GSP-1626-SM-5986N 60-69 years, female 64.1
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 63.3
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 58.5
GTEX-17F9E-1826-SM-7IGMC 50-59 years, male 55.5
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 54.0
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 53.8
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 53.0
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 52.5
GTEX-ZF29-1726-SM-4WKFV 60-69 years, female 51.5
GTEX-1A3MV-1126-SM-718BS 30-39 years, male 50.6
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 50.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 13.8
FF:10014-101C5 62,83,84 years, mixed 13.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.