HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:82.9 nTPM
HPA:82.9 nTPM
GTEx:84.8 nTPM
FANTOM5:322.4 Scaled Tags Per Million
Pig:117.5 nTPM
Mouse:359.7 nTPM
Allen mouse:11.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014750Antibody CAB004260
Glial cells MediumHigh
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.9
Sample id Sample description nTPM
Hippocampus
nTPM: 78.4
2529 Female, age 94, left hemisphere 81.8
1855 Male, age 76, left hemisphere 81.7
1898 Male, age 80, left hemisphere 80.6
2621 Female, age 67, right hemisphere 78.6
1911 Female, age 85, right hemisphere 76.1
2148 Female, age 91, left hemisphere 71.5
Dentate gyrus
nTPM: 77.1
2530 Female, age 94, left hemisphere 97.6
2010 Male, age 76, both hemispheres 84.8
2528 Male, age 74, both hemispheres 84.5
2246 Female, age 85, both hemispheres 69.1
1927 Female, age 91, both hemispheres 65.9
2531 Female, age 67, both hemispheres 60.9
Entorhinal gyrus
nTPM: 74.6
2117 Female, age 91, right hemisphere 98.6
2764 Male, age 80, right hemisphere 80.1
1787 Male, age 76, left hemisphere 71.9
1938 Female, age 85, left hemisphere 69.8
2613 Female, age 94, left hemisphere 69.2
2686 Male, age 75, right hemisphere 57.6
Hippocampus, CA1
nTPM: 71.3
1873 Female, age 85, both hemispheres 76.3
2527 Male, age 74, both hemispheres 76.0
2749 Male, age 80, left hemisphere 72.3
2082 Female, age 91, right hemisphere 66.9
2045 Male, age 76, both hemispheres 64.8
Hippocampus, CA2
nTPM: 79.0
2249 Male, age 74, both hemispheres 93.7
1963 Male, age 80, left hemisphere 81.6
2437 Female, age 94, left hemisphere 77.9
1940 Female, age 85, left hemisphere 77.5
2113 Female, age 91, right hemisphere 73.6
1892 Male, age 76, both hemispheres 69.6
Hippocampus, CA3
nTPM: 69.6
1891 Female, age 85, both hemispheres 80.0
2436 Male, age 74, both hemispheres 73.0
1867 Male, age 76, both hemispheres 72.9
2620 Female, age 94, left hemisphere 71.2
2137 Male, age 80, left hemisphere 63.4
2861 Female, age 67, both hemispheres 57.1
Parahippocampal cortex
nTPM: 68.9
1990 Female, age 91, right hemisphere 76.4
2532 Female, age 72, left hemisphere 74.0
2018 Male, age 76, both hemispheres 72.9
1850 Male, age 80, both hemispheres 71.6
2692 Male, age 74, both hemispheres 69.4
1933 Female, age 85, both hemispheres 68.4
2245 Female, age 91, both hemispheres 68.0
2250 Female, age 67, right hemisphere 67.3
2693 Female, age 94, both hemispheres 63.2
2622 Female, age 67, right hemisphere 57.7
Perirhinal gyrus
nTPM: 66.1
1794 Male, age 80, right hemisphere 69.6
2521 Female, age 94, right hemisphere 66.7
1847 Female, age 91, left hemisphere 65.4
1841 Female, age 85, right hemisphere 65.3
2848 Male, age 76, right hemisphere 63.5
Subiculum
nTPM: 82.9
2042 Male, age 76, both hemispheres 94.6
1901 Male, age 80, both hemispheres 86.4
2729 Female, age 91, right hemisphere 81.9
2619 Male, age 74, both hemispheres 80.0
1977 Female, age 85, both hemispheres 77.9
2438 Female, age 94, left hemisphere 76.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 84.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 84.8
Samples: 197

Max nTPM: 181.5
Min nTPM: 45.4
Std nTPM: 25.5
Median nTPM: 81.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 181.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 158.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 155.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 151.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 150.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 149.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 145.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 144.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 144.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 142.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 139.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 322.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 322.4
FF:10153-102I9 76 years, female 357.2
FF:10169-103B7 60 years, female 287.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 117.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 117.6
Samples: 4

Max nTPM: 160.3
Min nTPM: 74.7
Sample A Female 160.3
Sample B Female 107.2
Sample C Male 128.0
Sample D Male 74.7
Entorhinal cortex
nTPM: 92.1
Samples: 4

Max nTPM: 105.8
Min nTPM: 75.3
Sample A Female 93.6
Sample B Female 93.5
Sample C Male 105.8
Sample D Male 75.3
Subiculum
nTPM: 97.7
Samples: 4

Max nTPM: 124.3
Min nTPM: 86.1
Sample A Female 124.3
Sample B Female 91.0
Sample C Male 89.5
Sample D Male 86.1
Ventral hippocampus
nTPM: 110.2
Samples: 4

Max nTPM: 143.4
Min nTPM: 74.4
Sample A Female 109.7
Sample B Female 74.4
Sample C Male 143.4
Sample D Male 113.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 359.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 333.3
Samples: 4

Max nTPM: 346.1
Min nTPM: 321.1
Sample A Male 346.1
Sample B Male 324.5
Sample C Female 341.4
Sample D Female 321.1
Hippocampal formation
nTPM: 359.7
Samples: 4

Max nTPM: 392.7
Min nTPM: 331.3
Sample A Male 354.6
Sample B Male 331.3
Sample C Female 392.7
Sample D Female 360.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.9
69736022 Antisense, RP_050503_04_A07, Mouse strain C57BL/6J (56 days, male) 11.9

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