HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:12.3 nTPM
HPA:12.3 nTPM
GTEx:8.0 nTPM
FANTOM5:15.6 Scaled Tags Per Million
Pig:17.2 nTPM
Mouse:38.5 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044428
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.3
Sample id Sample description nTPM
Hippocampus
nTPM: 6.3
1898 Male, age 80, left hemisphere 10.7
1855 Male, age 76, left hemisphere 9.5
2621 Female, age 67, right hemisphere 7.6
2148 Female, age 91, left hemisphere 6.0
1911 Female, age 85, right hemisphere 3.9
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 7.0
2531 Female, age 67, both hemispheres 10.5
2010 Male, age 76, both hemispheres 10.3
1927 Female, age 91, both hemispheres 6.7
2530 Female, age 94, left hemisphere 5.9
2246 Female, age 85, both hemispheres 5.0
2528 Male, age 74, both hemispheres 3.6
Entorhinal gyrus
nTPM: 1.8
2613 Female, age 94, left hemisphere 3.2
2764 Male, age 80, right hemisphere 3.2
1787 Male, age 76, left hemisphere 2.2
2686 Male, age 75, right hemisphere 1.6
1938 Female, age 85, left hemisphere 0.5
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 12.3
2749 Male, age 80, left hemisphere 37.4
2045 Male, age 76, both hemispheres 7.9
1873 Female, age 85, both hemispheres 6.8
2527 Male, age 74, both hemispheres 5.9
2082 Female, age 91, right hemisphere 3.4
Hippocampus, CA2
nTPM: 3.8
1892 Male, age 76, both hemispheres 7.5
1963 Male, age 80, left hemisphere 5.8
2437 Female, age 94, left hemisphere 3.4
2249 Male, age 74, both hemispheres 3.1
2113 Female, age 91, right hemisphere 2.0
1940 Female, age 85, left hemisphere 1.3
Hippocampus, CA3
nTPM: 10.8
2137 Male, age 80, left hemisphere 29.4
2861 Female, age 67, both hemispheres 14.6
2620 Female, age 94, left hemisphere 9.5
1867 Male, age 76, both hemispheres 9.0
2436 Male, age 74, both hemispheres 1.5
1891 Female, age 85, both hemispheres 0.9
Parahippocampal cortex
nTPM: 3.1
2245 Female, age 91, both hemispheres 7.8
2693 Female, age 94, both hemispheres 5.2
2622 Female, age 67, right hemisphere 4.9
1933 Female, age 85, both hemispheres 3.2
2018 Male, age 76, both hemispheres 3.1
2250 Female, age 67, right hemisphere 2.9
2532 Female, age 72, left hemisphere 2.6
1850 Male, age 80, both hemispheres 1.4
1990 Female, age 91, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 5.0
2521 Female, age 94, right hemisphere 9.1
1847 Female, age 91, left hemisphere 5.6
1794 Male, age 80, right hemisphere 5.0
1841 Female, age 85, right hemisphere 4.2
2848 Male, age 76, right hemisphere 0.8
Subiculum
nTPM: 3.1
1901 Male, age 80, both hemispheres 13.1
2729 Female, age 91, right hemisphere 3.0
2042 Male, age 76, both hemispheres 1.6
1977 Female, age 85, both hemispheres 0.6
2438 Female, age 94, left hemisphere 0.6
2619 Male, age 74, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.0
Samples: 197

Max nTPM: 38.2
Min nTPM: 0.4
Std nTPM: 6.0
Median nTPM: 6.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 30.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 26.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 25.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 24.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 21.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 20.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 19.9
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 19.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 18.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 18.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.6
FF:10169-103B7 60 years, female 20.9
FF:10153-102I9 76 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.2
Samples: 4

Max nTPM: 21.9
Min nTPM: 9.5
Sample A Female 21.6
Sample B Female 21.9
Sample C Male 9.5
Sample D Male 11.8
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 20.2
Min nTPM: 14.7
Sample A Female 20.2
Sample B Female 14.7
Sample C Male 18.0
Sample D Male 15.8
Subiculum
nTPM: 9.6
Samples: 4

Max nTPM: 10.9
Min nTPM: 8.1
Sample A Female 10.4
Sample B Female 8.1
Sample C Male 10.9
Sample D Male 8.8
Ventral hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 19.3
Min nTPM: 9.5
Sample A Female 18.9
Sample B Female 9.5
Sample C Male 16.5
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.2
Samples: 4

Max nTPM: 28.3
Min nTPM: 25.6
Sample A Male 25.6
Sample B Male 28.2
Sample C Female 26.5
Sample D Female 28.3
Hippocampal formation
nTPM: 38.5
Samples: 4

Max nTPM: 43.9
Min nTPM: 32.1
Sample A Male 32.1
Sample B Male 41.8
Sample C Female 43.9
Sample D Female 36.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
1826 Antisense, RP_040507_01_H01, Mouse strain C57BL/6J (56 days, male) 6.6
1827 Antisense, RP_040507_01_H01, Mouse strain C57BL/6J (56 days, male) 6.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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