HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:577.4 nTPM
HPA:577.4 nTPM
GTEx:192.2 nTPM
FANTOM5:168.9 Scaled Tags Per Million
Pig:52.1 nTPM
Mouse:155.5 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041213
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 577.4
Sample id Sample description nTPM
Hippocampus
nTPM: 571.8
1898 Male, age 80, left hemisphere 601.1
2529 Female, age 94, left hemisphere 587.1
1855 Male, age 76, left hemisphere 563.9
2148 Female, age 91, left hemisphere 563.5
2621 Female, age 67, right hemisphere 559.7
1911 Female, age 85, right hemisphere 555.5
Dentate gyrus
nTPM: 565.9
2530 Female, age 94, left hemisphere 576.2
1927 Female, age 91, both hemispheres 575.6
2528 Male, age 74, both hemispheres 568.8
2010 Male, age 76, both hemispheres 567.9
2246 Female, age 85, both hemispheres 557.9
2531 Female, age 67, both hemispheres 549.3
Entorhinal gyrus
nTPM: 568.4
2764 Male, age 80, right hemisphere 591.0
1787 Male, age 76, left hemisphere 574.4
2117 Female, age 91, right hemisphere 573.9
1938 Female, age 85, left hemisphere 569.5
2613 Female, age 94, left hemisphere 550.7
2686 Male, age 75, right hemisphere 550.6
Hippocampus, CA1
nTPM: 577.4
2749 Male, age 80, left hemisphere 620.6
2527 Male, age 74, both hemispheres 577.6
2045 Male, age 76, both hemispheres 563.4
1873 Female, age 85, both hemispheres 562.7
2082 Female, age 91, right hemisphere 562.6
Hippocampus, CA2
nTPM: 570.6
1963 Male, age 80, left hemisphere 594.6
2249 Male, age 74, both hemispheres 580.5
1892 Male, age 76, both hemispheres 576.2
2437 Female, age 94, left hemisphere 563.7
2113 Female, age 91, right hemisphere 559.5
1940 Female, age 85, left hemisphere 549.1
Hippocampus, CA3
nTPM: 568.6
2137 Male, age 80, left hemisphere 589.9
2436 Male, age 74, both hemispheres 586.1
1867 Male, age 76, both hemispheres 571.1
2620 Female, age 94, left hemisphere 563.7
1891 Female, age 85, both hemispheres 557.4
2861 Female, age 67, both hemispheres 543.6
Parahippocampal cortex
nTPM: 561.3
1850 Male, age 80, both hemispheres 575.5
1990 Female, age 91, right hemisphere 574.4
1933 Female, age 85, both hemispheres 570.9
2245 Female, age 91, both hemispheres 565.6
2018 Male, age 76, both hemispheres 565.5
2250 Female, age 67, right hemisphere 564.2
2532 Female, age 72, left hemisphere 556.6
2692 Male, age 74, both hemispheres 554.3
2622 Female, age 67, right hemisphere 543.5
2693 Female, age 94, both hemispheres 541.9
Perirhinal gyrus
nTPM: 577.3
1847 Female, age 91, left hemisphere 597.4
1794 Male, age 80, right hemisphere 595.0
1841 Female, age 85, right hemisphere 575.2
2848 Male, age 76, right hemisphere 565.8
2521 Female, age 94, right hemisphere 553.0
Subiculum
nTPM: 561.0
1977 Female, age 85, both hemispheres 573.6
1901 Male, age 80, both hemispheres 573.0
2729 Female, age 91, right hemisphere 566.6
2619 Male, age 74, both hemispheres 562.4
2042 Male, age 76, both hemispheres 552.5
2438 Female, age 94, left hemisphere 537.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 192.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 192.2
Samples: 197

Max nTPM: 516.9
Min nTPM: 48.5
Std nTPM: 63.2
Median nTPM: 183.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 516.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 444.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 402.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 395.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 377.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 372.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 369.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 353.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 322.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 310.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 300.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 168.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 168.9
FF:10169-103B7 60 years, female 183.1
FF:10153-102I9 76 years, female 154.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 52.1
Samples: 4

Max nTPM: 72.7
Min nTPM: 39.5
Sample A Female 72.7
Sample B Female 47.9
Sample C Male 48.4
Sample D Male 39.5
Entorhinal cortex
nTPM: 48.6
Samples: 4

Max nTPM: 58.4
Min nTPM: 39.2
Sample A Female 49.2
Sample B Female 58.4
Sample C Male 47.6
Sample D Male 39.2
Subiculum
nTPM: 42.7
Samples: 4

Max nTPM: 57.7
Min nTPM: 31.7
Sample A Female 57.7
Sample B Female 44.2
Sample C Male 37.3
Sample D Male 31.7
Ventral hippocampus
nTPM: 48.8
Samples: 4

Max nTPM: 59.3
Min nTPM: 37.9
Sample A Female 50.6
Sample B Female 37.9
Sample C Male 59.3
Sample D Male 47.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 155.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 140.6
Samples: 4

Max nTPM: 143.9
Min nTPM: 137.1
Sample A Male 139.1
Sample B Male 142.4
Sample C Female 143.9
Sample D Female 137.1
Hippocampal formation
nTPM: 155.5
Samples: 4

Max nTPM: 166.4
Min nTPM: 144.5
Sample A Male 155.7
Sample B Male 144.5
Sample C Female 155.4
Sample D Female 166.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
69838573 Antisense, RP_050310_01_F12, Mouse strain C57BL/6J (56 days, male) 13.7

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