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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:2150.9 nTPM
GTEx:2150.9 nTPM
FANTOM5:16.7 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA059479Antibody CAB000027Antibody CAB000129Antibody CAB080101
Squamous epithelial cells HighHighMediumHigh








VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2150.9
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 2150.9
Samples: 156

Max nTPM: 9102.3
Min nTPM: 0.2
Std nTPM: 2073.5
Median nTPM: 1821.0
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 9102.3
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 8297.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 7747.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 7286.8
GTEX-14PKU-1326-SM-6871B 40-49 years, female 7239.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 7184.7
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 6901.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 6320.6
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 5962.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 5915.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 5831.5
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 5820.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 5816.6
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 5284.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 5236.3
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 5147.3
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 5140.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 4730.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 4676.0
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 4247.2
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 4183.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 4097.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 4081.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 4076.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 3931.4
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 3918.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 3903.6
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 3879.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 3877.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 3865.7
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 3808.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 3706.1
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 3609.6
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 3598.2
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 3554.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 3548.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 3523.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 3513.1
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 3471.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 3463.3
GTEX-11I78-2026-SM-5987C 50-59 years, female 3415.3
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 3397.2
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 3363.1
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 3264.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 3258.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 3191.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 3185.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 3157.2
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 3156.9
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 3055.4
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 2975.3
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 2929.0
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 2889.5
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 2798.5
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 2766.5
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 2704.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 2539.4
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 2517.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 2481.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 2466.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 2437.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 2430.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 2417.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 2356.6
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 2329.4
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 2315.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 2220.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 2183.1
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 2126.8
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 2073.3
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 2052.0
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 2049.8
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 2030.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1933.5
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1877.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1840.1
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 1831.1
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1824.3
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1817.8
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1787.9
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1776.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 1610.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1573.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1551.2
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1523.1
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 1441.5
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1437.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1397.0
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1338.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1293.4
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1229.5
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1152.8
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 1136.8
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1107.2
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 1073.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 995.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 946.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 901.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 885.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 865.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 838.5
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 799.0
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 771.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 705.3
GTEX-16NPV-2526-SM-6M483 50-59 years, female 686.4
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 673.6
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 554.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 548.6
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 528.0
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 524.4
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 453.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 294.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 277.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 228.4
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 209.2
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 207.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 206.4
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 176.8
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 170.6
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 167.0
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 47.1
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 44.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 43.2
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 42.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 22.4
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 12.5
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 12.2
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 11.1
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 10.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 8.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 7.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 7.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 6.6
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 6.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 5.6
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 4.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 3.9
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 3.3
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 3.3
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 3.0
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 3.0
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 2.8
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 2.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 2.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 2.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 2.1
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 2.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 1.9
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1.7
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1.1
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 0.6
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 0.5
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 0.2
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 16.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 16.7
FF:10204-103F6 68 years, female 16.7

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