HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:23.4 nTPM
HPA:23.4 nTPM
GTEx:24.1 nTPM
FANTOM5:25.5 Scaled Tags Per Million
Pig:23.3 nTPM
Mouse:80.0 nTPM
Allen mouse:11.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027470
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.4
Sample id Sample description nTPM
Hippocampus
nTPM: 14.9
1855 Male, age 76, left hemisphere 16.8
1898 Male, age 80, left hemisphere 16.0
1911 Female, age 85, right hemisphere 15.0
2621 Female, age 67, right hemisphere 14.8
2529 Female, age 94, left hemisphere 13.6
2148 Female, age 91, left hemisphere 13.0
Dentate gyrus
nTPM: 18.1
2010 Male, age 76, both hemispheres 20.9
2530 Female, age 94, left hemisphere 19.3
2246 Female, age 85, both hemispheres 18.8
2531 Female, age 67, both hemispheres 18.6
1927 Female, age 91, both hemispheres 15.8
2528 Male, age 74, both hemispheres 15.3
Entorhinal gyrus
nTPM: 23.4
2613 Female, age 94, left hemisphere 33.8
1938 Female, age 85, left hemisphere 28.5
1787 Male, age 76, left hemisphere 24.4
2764 Male, age 80, right hemisphere 21.5
2686 Male, age 75, right hemisphere 19.9
2117 Female, age 91, right hemisphere 12.4
Hippocampus, CA1
nTPM: 18.5
2749 Male, age 80, left hemisphere 25.8
2045 Male, age 76, both hemispheres 19.6
1873 Female, age 85, both hemispheres 17.0
2527 Male, age 74, both hemispheres 15.7
2082 Female, age 91, right hemisphere 14.5
Hippocampus, CA2
nTPM: 16.4
1892 Male, age 76, both hemispheres 17.5
2437 Female, age 94, left hemisphere 17.4
1963 Male, age 80, left hemisphere 16.7
2249 Male, age 74, both hemispheres 16.1
2113 Female, age 91, right hemisphere 15.6
1940 Female, age 85, left hemisphere 15.3
Hippocampus, CA3
nTPM: 17.4
2137 Male, age 80, left hemisphere 21.5
2861 Female, age 67, both hemispheres 20.3
2620 Female, age 94, left hemisphere 17.5
1867 Male, age 76, both hemispheres 16.8
2436 Male, age 74, both hemispheres 15.2
1891 Female, age 85, both hemispheres 13.4
Parahippocampal cortex
nTPM: 21.5
1933 Female, age 85, both hemispheres 25.5
2250 Female, age 67, right hemisphere 25.0
2532 Female, age 72, left hemisphere 23.7
2245 Female, age 91, both hemispheres 23.3
2693 Female, age 94, both hemispheres 22.5
1850 Male, age 80, both hemispheres 21.3
2622 Female, age 67, right hemisphere 20.8
1990 Female, age 91, right hemisphere 18.5
2692 Male, age 74, both hemispheres 18.1
2018 Male, age 76, both hemispheres 16.1
Perirhinal gyrus
nTPM: 22.7
1847 Female, age 91, left hemisphere 27.8
2521 Female, age 94, right hemisphere 24.5
1794 Male, age 80, right hemisphere 21.7
1841 Female, age 85, right hemisphere 20.4
2848 Male, age 76, right hemisphere 19.0
Subiculum
nTPM: 15.3
1977 Female, age 85, both hemispheres 20.8
2619 Male, age 74, both hemispheres 17.1
2042 Male, age 76, both hemispheres 14.8
1901 Male, age 80, both hemispheres 13.7
2438 Female, age 94, left hemisphere 13.6
2729 Female, age 91, right hemisphere 11.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.1
Samples: 197

Max nTPM: 53.3
Min nTPM: 11.1
Std nTPM: 8.6
Median nTPM: 22.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 53.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 51.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 48.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 48.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 47.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 45.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 43.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 42.1
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 41.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 41.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 41.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.5
FF:10169-103B7 60 years, female 29.2
FF:10153-102I9 76 years, female 21.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 22.3
Min nTPM: 14.7
Sample A Female 20.6
Sample B Female 22.3
Sample C Male 14.7
Sample D Male 19.8
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 25.0
Min nTPM: 17.4
Sample A Female 23.9
Sample B Female 17.4
Sample C Male 25.0
Sample D Male 22.7
Subiculum
nTPM: 23.3
Samples: 4

Max nTPM: 28.5
Min nTPM: 20.1
Sample A Female 28.5
Sample B Female 23.3
Sample C Male 21.3
Sample D Male 20.1
Ventral hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 23.7
Min nTPM: 17.4
Sample A Female 20.8
Sample B Female 19.7
Sample C Male 23.7
Sample D Male 17.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 80.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 80.0
Samples: 4

Max nTPM: 87.8
Min nTPM: 70.4
Sample A Male 81.0
Sample B Male 87.8
Sample C Female 70.4
Sample D Female 80.7
Hippocampal formation
nTPM: 58.8
Samples: 4

Max nTPM: 61.8
Min nTPM: 55.9
Sample A Male 61.8
Sample B Male 55.9
Sample C Female 58.7
Sample D Female 58.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.5
74581382 Antisense, RP_051214_01_C07, Mouse strain C57BL/6J (56 days, male) 11.5
75692716 Antisense, RP_051214_01_C07, Mouse strain C57BL/6J (56 days, male) 8.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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