HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:56.1 nTPM
HPA:56.1 nTPM
GTEx:47.7 nTPM
FANTOM5:71.1 Scaled Tags Per Million
Pig:101.0 nTPM
Mouse:127.8 nTPM
Allen mouse:14.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB022645
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.1
Sample id Sample description nTPM
Hippocampus
nTPM: 56.1
1898 Male, age 80, left hemisphere 59.6
1855 Male, age 76, left hemisphere 57.3
1911 Female, age 85, right hemisphere 56.8
2529 Female, age 94, left hemisphere 55.3
2148 Female, age 91, left hemisphere 54.6
2621 Female, age 67, right hemisphere 52.7
Dentate gyrus
nTPM: 55.9
1927 Female, age 91, both hemispheres 59.8
2010 Male, age 76, both hemispheres 59.4
2528 Male, age 74, both hemispheres 57.5
2530 Female, age 94, left hemisphere 54.8
2246 Female, age 85, both hemispheres 54.6
2531 Female, age 67, both hemispheres 49.4
Entorhinal gyrus
nTPM: 51.2
1938 Female, age 85, left hemisphere 55.2
2117 Female, age 91, right hemisphere 54.5
1787 Male, age 76, left hemisphere 52.2
2686 Male, age 75, right hemisphere 48.8
2764 Male, age 80, right hemisphere 48.5
2613 Female, age 94, left hemisphere 48.1
Hippocampus, CA1
nTPM: 55.9
1873 Female, age 85, both hemispheres 60.6
2527 Male, age 74, both hemispheres 56.4
2749 Male, age 80, left hemisphere 56.2
2045 Male, age 76, both hemispheres 53.8
2082 Female, age 91, right hemisphere 52.5
Hippocampus, CA2
nTPM: 55.9
1963 Male, age 80, left hemisphere 60.9
1892 Male, age 76, both hemispheres 59.6
2249 Male, age 74, both hemispheres 56.9
1940 Female, age 85, left hemisphere 53.6
2113 Female, age 91, right hemisphere 52.2
2437 Female, age 94, left hemisphere 52.2
Hippocampus, CA3
nTPM: 54.1
1891 Female, age 85, both hemispheres 59.1
2436 Male, age 74, both hemispheres 54.9
2137 Male, age 80, left hemisphere 54.7
1867 Male, age 76, both hemispheres 54.5
2620 Female, age 94, left hemisphere 51.8
2861 Female, age 67, both hemispheres 49.7
Parahippocampal cortex
nTPM: 52.2
2692 Male, age 74, both hemispheres 55.0
1990 Female, age 91, right hemisphere 54.9
1850 Male, age 80, both hemispheres 54.8
1933 Female, age 85, both hemispheres 53.8
2250 Female, age 67, right hemisphere 53.7
2018 Male, age 76, both hemispheres 50.8
2693 Female, age 94, both hemispheres 50.7
2245 Female, age 91, both hemispheres 50.6
2532 Female, age 72, left hemisphere 49.9
2622 Female, age 67, right hemisphere 47.8
Perirhinal gyrus
nTPM: 52.9
1841 Female, age 85, right hemisphere 55.0
1847 Female, age 91, left hemisphere 53.3
1794 Male, age 80, right hemisphere 52.5
2521 Female, age 94, right hemisphere 51.8
2848 Male, age 76, right hemisphere 51.7
Subiculum
nTPM: 54.3
2729 Female, age 91, right hemisphere 55.9
1977 Female, age 85, both hemispheres 54.6
2042 Male, age 76, both hemispheres 54.4
2619 Male, age 74, both hemispheres 54.2
1901 Male, age 80, both hemispheres 54.0
2438 Female, age 94, left hemisphere 53.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.7
Samples: 197

Max nTPM: 78.0
Min nTPM: 32.9
Std nTPM: 8.0
Median nTPM: 46.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 78.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 74.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 71.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 69.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 67.4
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 67.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 66.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 66.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 65.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 65.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 64.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.1
FF:10153-102I9 76 years, female 83.6
FF:10169-103B7 60 years, female 58.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 101.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 101.0
Samples: 4

Max nTPM: 136.4
Min nTPM: 86.4
Sample A Female 136.4
Sample B Female 94.4
Sample C Male 86.8
Sample D Male 86.4
Entorhinal cortex
nTPM: 67.9
Samples: 4

Max nTPM: 81.5
Min nTPM: 60.0
Sample A Female 64.8
Sample B Female 81.5
Sample C Male 65.4
Sample D Male 60.0
Subiculum
nTPM: 71.1
Samples: 4

Max nTPM: 86.1
Min nTPM: 59.7
Sample A Female 86.1
Sample B Female 65.8
Sample C Male 59.7
Sample D Male 72.6
Ventral hippocampus
nTPM: 78.5
Samples: 4

Max nTPM: 100.4
Min nTPM: 61.8
Sample A Female 100.4
Sample B Female 61.8
Sample C Male 74.9
Sample D Male 76.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 127.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 96.2
Samples: 4

Max nTPM: 101.8
Min nTPM: 88.8
Sample A Male 88.8
Sample B Male 100.4
Sample C Female 101.8
Sample D Female 93.6
Hippocampal formation
nTPM: 127.8
Samples: 4

Max nTPM: 150.5
Min nTPM: 111.6
Sample A Male 120.9
Sample B Male 128.1
Sample C Female 150.5
Sample D Female 111.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.8
513023 Antisense, RP_040810_01_B03, Mouse strain C57BL/6J (56 days, male) 14.8

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