HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:9.9 nTPM
HPA:9.9 nTPM
GTEx:57.2 nTPM
FANTOM5:0.0 Scaled Tags Per Million
Pig:6.9 nTPM
Mouse:9.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012014Antibody CAB000132
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.9
Sample id Sample description nTPM
Hippocampus
nTPM: 9.8
1855 Male, age 76, left hemisphere 10.0
1898 Male, age 80, left hemisphere 9.9
2529 Female, age 94, left hemisphere 9.9
1911 Female, age 85, right hemisphere 9.8
2148 Female, age 91, left hemisphere 9.7
2621 Female, age 67, right hemisphere 9.7
Dentate gyrus
nTPM: 9.8
2530 Female, age 94, left hemisphere 10.2
2010 Male, age 76, both hemispheres 10.1
1927 Female, age 91, both hemispheres 9.7
2246 Female, age 85, both hemispheres 9.6
2528 Male, age 74, both hemispheres 9.6
2531 Female, age 67, both hemispheres 9.5
Entorhinal gyrus
nTPM: 9.4
1938 Female, age 85, left hemisphere 9.8
2117 Female, age 91, right hemisphere 9.7
2686 Male, age 75, right hemisphere 9.5
1787 Male, age 76, left hemisphere 9.2
2764 Male, age 80, right hemisphere 9.2
2613 Female, age 94, left hemisphere 8.9
Hippocampus, CA1
nTPM: 9.9
2045 Male, age 76, both hemispheres 10.3
2749 Male, age 80, left hemisphere 10.2
1873 Female, age 85, both hemispheres 10.0
2527 Male, age 74, both hemispheres 9.7
2082 Female, age 91, right hemisphere 9.1
Hippocampus, CA2
nTPM: 9.7
1892 Male, age 76, both hemispheres 10.4
1963 Male, age 80, left hemisphere 9.9
2437 Female, age 94, left hemisphere 9.8
2249 Male, age 74, both hemispheres 9.5
1940 Female, age 85, left hemisphere 9.4
2113 Female, age 91, right hemisphere 9.4
Hippocampus, CA3
nTPM: 9.9
1867 Male, age 76, both hemispheres 10.4
2137 Male, age 80, left hemisphere 10.3
1891 Female, age 85, both hemispheres 10.0
2436 Male, age 74, both hemispheres 9.5
2620 Female, age 94, left hemisphere 9.5
2861 Female, age 67, both hemispheres 9.5
Parahippocampal cortex
nTPM: 9.4
2018 Male, age 76, both hemispheres 9.8
2692 Male, age 74, both hemispheres 9.8
2250 Female, age 67, right hemisphere 9.7
1850 Male, age 80, both hemispheres 9.5
1990 Female, age 91, right hemisphere 9.5
1933 Female, age 85, both hemispheres 9.4
2245 Female, age 91, both hemispheres 9.3
2532 Female, age 72, left hemisphere 9.3
2693 Female, age 94, both hemispheres 9.2
2622 Female, age 67, right hemisphere 8.9
Perirhinal gyrus
nTPM: 9.2
1841 Female, age 85, right hemisphere 9.6
2848 Male, age 76, right hemisphere 9.4
1847 Female, age 91, left hemisphere 9.2
2521 Female, age 94, right hemisphere 9.0
1794 Male, age 80, right hemisphere 8.9
Subiculum
nTPM: 9.6
2042 Male, age 76, both hemispheres 10.0
1901 Male, age 80, both hemispheres 9.6
2438 Female, age 94, left hemisphere 9.6
1977 Female, age 85, both hemispheres 9.5
2619 Male, age 74, both hemispheres 9.3
2729 Female, age 91, right hemisphere 9.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.2
Samples: 197

Max nTPM: 177.4
Min nTPM: 22.9
Std nTPM: 18.7
Median nTPM: 53.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 177.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 166.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 106.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 105.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 100.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 98.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 93.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 90.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 87.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 87.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 86.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.0
FF:10153-102I9 76 years, female 0.1
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.8
Samples: 4

Max nTPM: 8.8
Min nTPM: 4.6
Sample A Female 8.3
Sample B Female 8.8
Sample C Male 4.6
Sample D Male 5.6
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.6
Sample A Female 6.1
Sample B Female 4.6
Sample C Male 4.9
Sample D Male 4.9
Subiculum
nTPM: 4.4
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.5
Sample A Female 5.1
Sample B Female 3.5
Sample C Male 5.1
Sample D Male 3.9
Ventral hippocampus
nTPM: 5.6
Samples: 4

Max nTPM: 9.1
Min nTPM: 4.2
Sample A Female 4.2
Sample B Female 4.5
Sample C Male 4.5
Sample D Male 9.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 8.4
Min nTPM: 4.4
Sample A Male 7.9
Sample B Male 7.2
Sample C Female 8.4
Sample D Female 4.4
Hippocampal formation
nTPM: 9.5
Samples: 4

Max nTPM: 11.5
Min nTPM: 7.3
Sample A Male 11.5
Sample B Male 11.3
Sample C Female 8.0
Sample D Female 7.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69735921 Antisense, RP_050503_03_G08, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.