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RPS23
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1430.2 nTPM
HPA:846.2 nTPM
GTEx:1430.2 nTPM
FANTOM5:810.4 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA054853
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 846.2
overview
Male, age 65
Small intestine sample 232
nTPM: 1090.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 744
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 754.6
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 796

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1430.2
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1430.2
Samples: 187

Max nTPM: 3065.5
Min nTPM: 716.3
Std nTPM: 425.0
Median nTPM: 1397.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 3065.5
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 3022.4
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2763.2
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2591.2
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2585.7
GTEX-183FY-1626-SM-793D8 20-29 years, male 2443.9
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2359.9
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2356.1
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 2273.8
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2270.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2236.9
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2213.6
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2181.2
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2019.0
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2015.0
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1996.4
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1979.4
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1974.4
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1923.4
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1899.7
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1880.7
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1877.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1862.0
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1860.9
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1839.6
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1816.4
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1814.6
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1792.8
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1781.1
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1773.4
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1768.9
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1756.6
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1756.6
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1745.5
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1740.0
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1734.1
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1729.6
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1711.5
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1688.9
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1679.5
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1671.9
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1661.7
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1645.7
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1644.6
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1643.7
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1636.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1632.8
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1628.6
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1626.6
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1624.6
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1612.8
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1608.7
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1608.5
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1598.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1590.1
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1580.6
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1580.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1575.1
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1574.8
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1570.6
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1568.9
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1564.1
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1555.1
GTEX-1192X-2526-SM-59868 50-59 years, male 1547.5
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1545.6
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1542.8
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1541.1
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1538.5
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1535.4
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1534.7
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1533.0
GTEX-1C475-1426-SM-793CH 40-49 years, female 1531.7
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1523.2
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1518.8
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1517.5
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1513.1
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1503.4
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1497.2
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1490.7
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1486.7
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1467.4
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1437.0
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1436.0
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1433.8
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1432.8
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1430.6
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1428.4
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1425.5
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1420.7
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1415.7
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1413.8
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1406.0
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1401.6
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1397.9
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1397.6
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1388.0
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1376.8
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1376.4
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1371.5
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1368.2
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1365.9
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1356.8
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1344.2
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1341.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1338.2
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1319.2
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1314.3
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1302.0
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1297.7
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1295.1
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1275.7
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1268.5
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1265.1
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1256.7
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1248.8
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1241.3
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1241.1
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1238.5
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1232.1
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1231.4
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1221.2
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1215.5
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1213.0
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1212.6
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1210.3
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1207.1
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1203.3
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1198.6
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1198.5
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1198.3
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1193.8
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1193.5
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1171.6
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1153.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1151.8
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1150.7
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1136.8
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1136.8
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1115.0
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1114.9
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1113.4
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1111.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1109.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1104.6
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1087.8
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1086.3
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1073.8
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1070.1
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1066.1
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1060.7
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1055.6
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1050.0
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1042.4
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1040.1
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1039.7
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1032.2
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1030.7
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1004.3
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1004.2
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1002.9
GTEX-14PN3-2026-SM-68729 60-69 years, female 996.2
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 995.8
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 991.4
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 986.6
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 968.8
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 946.1
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 945.1
GTEX-144GM-1026-SM-79OKU 20-29 years, male 943.1
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 940.0
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 934.1
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 921.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 910.1
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 908.0
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 901.1
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 879.8
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 877.1
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 873.9
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 867.3
GTEX-1122O-1326-SM-5H11F 60-69 years, female 850.5
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 848.7
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 819.2
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 812.7
GTEX-ZTSS-0926-SM-59865 40-49 years, male 804.2
GTEX-111YS-1426-SM-5GID8 60-69 years, male 803.3
GTEX-YFCO-1326-SM-664NV 40-49 years, male 769.0
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 766.1
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 716.3
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 810.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 810.4
FF:10024-101D6 15,40,85 years, mixed 810.4

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