HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.1 nTPM
HPA:15.1 nTPM
GTEx:19.4 nTPM
FANTOM5:22.8 Scaled Tags Per Million
Pig:6.8 nTPM
Mouse:7.8 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056304
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.1
Sample id Sample description nTPM
Hippocampus
nTPM: 13.1
1911 Female, age 85, right hemisphere 15.1
2529 Female, age 94, left hemisphere 13.7
1898 Male, age 80, left hemisphere 13.4
1855 Male, age 76, left hemisphere 12.9
2621 Female, age 67, right hemisphere 12.9
2148 Female, age 91, left hemisphere 10.9
Dentate gyrus
nTPM: 13.1
2530 Female, age 94, left hemisphere 21.3
2010 Male, age 76, both hemispheres 14.7
2528 Male, age 74, both hemispheres 12.9
2246 Female, age 85, both hemispheres 11.0
2531 Female, age 67, both hemispheres 10.9
1927 Female, age 91, both hemispheres 7.7
Entorhinal gyrus
nTPM: 12.9
2117 Female, age 91, right hemisphere 15.6
2686 Male, age 75, right hemisphere 15.3
2764 Male, age 80, right hemisphere 11.9
1787 Male, age 76, left hemisphere 11.6
1938 Female, age 85, left hemisphere 11.5
2613 Female, age 94, left hemisphere 11.1
Hippocampus, CA1
nTPM: 11.2
2527 Male, age 74, both hemispheres 13.4
1873 Female, age 85, both hemispheres 12.8
2082 Female, age 91, right hemisphere 11.9
2045 Male, age 76, both hemispheres 9.6
2749 Male, age 80, left hemisphere 8.4
Hippocampus, CA2
nTPM: 13.5
2249 Male, age 74, both hemispheres 17.3
1963 Male, age 80, left hemisphere 13.9
2437 Female, age 94, left hemisphere 13.9
1940 Female, age 85, left hemisphere 13.7
2113 Female, age 91, right hemisphere 12.2
1892 Male, age 76, both hemispheres 9.8
Hippocampus, CA3
nTPM: 11.7
2436 Male, age 74, both hemispheres 20.3
1891 Female, age 85, both hemispheres 14.9
1867 Male, age 76, both hemispheres 10.6
2861 Female, age 67, both hemispheres 9.4
2137 Male, age 80, left hemisphere 8.9
2620 Female, age 94, left hemisphere 6.4
Parahippocampal cortex
nTPM: 10.8
2692 Male, age 74, both hemispheres 14.7
2018 Male, age 76, both hemispheres 12.4
2532 Female, age 72, left hemisphere 12.0
1990 Female, age 91, right hemisphere 11.5
1850 Male, age 80, both hemispheres 10.6
2245 Female, age 91, both hemispheres 10.0
1933 Female, age 85, both hemispheres 9.5
2250 Female, age 67, right hemisphere 9.5
2622 Female, age 67, right hemisphere 9.5
2693 Female, age 94, both hemispheres 8.4
Perirhinal gyrus
nTPM: 9.1
2848 Male, age 76, right hemisphere 11.7
1847 Female, age 91, left hemisphere 8.6
2521 Female, age 94, right hemisphere 8.6
1794 Male, age 80, right hemisphere 8.5
1841 Female, age 85, right hemisphere 7.9
Subiculum
nTPM: 15.1
2042 Male, age 76, both hemispheres 19.4
1901 Male, age 80, both hemispheres 15.5
2438 Female, age 94, left hemisphere 15.5
2619 Male, age 74, both hemispheres 14.1
1977 Female, age 85, both hemispheres 13.1
2729 Female, age 91, right hemisphere 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.4
Samples: 197

Max nTPM: 53.0
Min nTPM: 5.3
Std nTPM: 9.8
Median nTPM: 17.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 53.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 52.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 48.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 47.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 46.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 43.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 41.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 41.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 40.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 40.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 39.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.8
FF:10169-103B7 60 years, female 24.0
FF:10153-102I9 76 years, female 21.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 8.4
Min nTPM: 5.0
Sample A Female 8.2
Sample B Female 5.8
Sample C Male 8.4
Sample D Male 5.0
Entorhinal cortex
nTPM: 5.7
Samples: 4

Max nTPM: 7.3
Min nTPM: 4.7
Sample A Female 5.0
Sample B Female 7.3
Sample C Male 5.7
Sample D Male 4.7
Subiculum
nTPM: 6.9
Samples: 4

Max nTPM: 7.3
Min nTPM: 6.2
Sample A Female 7.0
Sample B Female 6.9
Sample C Male 6.2
Sample D Male 7.3
Ventral hippocampus
nTPM: 6.4
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.6
Sample A Female 6.3
Sample B Female 5.6
Sample C Male 7.0
Sample D Male 6.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 7.1
Min nTPM: 4.7
Sample A Male 7.0
Sample B Male 4.7
Sample C Female 7.1
Sample D Female 6.7
Hippocampal formation
nTPM: 7.8
Samples: 4

Max nTPM: 10.5
Min nTPM: 6.3
Sample A Male 7.2
Sample B Male 6.3
Sample C Female 7.3
Sample D Female 10.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
75694304 Antisense, RP_060502_01_E05, Mouse strain C57BL/6J (56 days, male) 1.7

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