COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:42.3 nTPM
HPA:25.2 nTPM
GTEx:42.3 nTPM
FANTOM5:82.8 Scaled Tags Per Million

COLON - HPA RNA-seqi
Average nTPM 25.2
overview
Male, age 54 		Colon sample 67
nTPM: 25.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 23.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 34.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 21.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 28
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 25.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 21.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 19.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 29.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 24.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 23
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 28.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 24.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 42.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 42.3
Samples: 373

Max nTPM: 102.4
Min nTPM: 14.5
Std nTPM: 9.7
Median nTPM: 42.0
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 102.4
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 73.5
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 70.7
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 70.6
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 69.1
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 63.7
GTEX-1R9PO-2026-SM-E9J4N 60-69 years, female 63.0
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 61.7
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 61.7
GTEX-1JJEA-2526-SM-CY8HJ 60-69 years, male 61.4
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 60.9
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Colon - Transverse
Average nTPM: 29.4
Samples: 406

Max nTPM: 70.2
Min nTPM: 13.1
Std nTPM: 11.6
Median nTPM: 26.1
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 70.2
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 69.9
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 67.2
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 66.1
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 64.5
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 60.4
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 59.1
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 56.9
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 56.6
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 56.6
GTEX-1IKK5-2726-SM-CNPQ6 60-69 years, male 56.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 82.8
FF:10014-101C5 62,83,84 years, mixed 82.8

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.