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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 393.2
Min nTPM: 9.3
Std nTPM: 80.1
Median nTPM:
218_1
71 years, female
393.2
356_1
87 years, female
366.1
354_1
81 years, female
349.2
353_1
82 years, female
302.0
352_1
62 years, male
300.7
349_1
83 years, male
276.2
452_1
88 years, female
265.6
319_1
81 years, male
262.4
351_1
91 years, male
243.9
163_1
78 years, male
234.7
350_1
84 years, female
229.7
506_1
65 years, male
215.6
386_1
76 years, male
211.0
295_1
61 years, female
200.0
243_1
75 years, male
186.7
355_1
70 years, female
184.7
322_1
76 years, male
181.4
321_1
62 years, female
176.7
379_1
60 years, male
175.2
173_1
67 years, male
171.7
376_1
75 years, female
171.2
177_1
74 years, male
168.7
447_1
81 years, male
168.5
172_1
72 years, female
168.0
320_1
89 years, female
164.5
292_1
71 years, male
163.5
318_1
68 years, male
161.3
335_1
73 years, female
158.3
317_1
60 years, male
152.8
286_1
68 years, female
152.3
377_1
82 years, female
151.1
293_1
68 years, female
150.0
503_1
68 years, male
148.0
384_1
83 years, male
146.0
394_1
75 years, female
145.9
6_1
73 years, female
141.5
406_1
79 years, male
139.8
237_1
82 years, male
135.0
264_1
73 years, female
133.2
291_1
76 years, male
132.7
348_1
84 years, male
127.0
189_1
76 years, male
126.7
99_1
64 years, male
125.1
425_1
59 years, female
122.8
517_1
88 years, male
122.6
389_1
86 years, female
121.6
404_1
82 years, female
121.6
316_1
62 years, male
118.3
375_1
74 years, female
107.5
251_1
78 years, male
106.2
480_1
63 years, male
105.5
115_1
83 years, male
99.9
229_1
69 years, female
97.1
4_1
88 years, female
95.8
347_1
72 years, male
93.0
405_1
91 years, male
88.8
396_1
62 years, male
87.2
17_1
71 years, male
86.3
137_1
83 years, male
82.5
526_1
61 years, male
82.5
314_1
67 years, male
80.9
254_1
77 years, female
80.6
468_1
89 years, male
80.5
145_1
84 years, male
76.2
288_1
66 years, female
73.0
153_1
70 years, female
72.8
35_1
74 years, female
72.6
266_1
85 years, male
72.1
126_1
63 years, male
72.0
9_1
66 years, female
71.3
311_1
78 years, male
70.7
41_1
94 years, female
70.6
265_1
87 years, male
70.5
518_1
75 years, female
69.0
18_1
88 years, male
64.8
120_1
70 years, female
64.8
246_1
77 years, male
64.8
2_1
77 years, female
59.7
324_1
76 years, male
59.4
499_1
55 years, female
59.3
217_1
76 years, male
57.5
117_1
61 years, male
54.8
142_1
61 years, female
53.9
109_1
81 years, female
50.2
307_1
66 years, female
49.6
315_1
62 years, female
46.9
313_1
79 years, female
46.8
42_1
85 years, male
42.4
119_1
70 years, female
40.4
81_1
67 years, male
38.0
162_1
79 years, female
37.6
139_1
64 years, female
36.6
43_1
64 years, female
35.8
32_1
67 years, male
31.6
308_1
70 years, female
31.2
495_1
57 years, female
29.4
414_1
84 years, female
28.4
415_1
77 years, female
27.7
89_1
63 years, male
27.1
501_1
88 years, male
25.4
466_1
57 years, female
20.7
149_1
88 years, male
18.2
491_1
89 years, female
14.8
490_1
67 years, female
10.1
413_1
59 years, female
9.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
