HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:121.2 nTPM
HPA:121.2 nTPM
GTEx:144.8 nTPM
FANTOM5:83.5 Scaled Tags Per Million
Mouse:32.0 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042874
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 121.2
Sample id Sample description nTPM
Hippocampus
nTPM: 119.1
1898 Male, age 80, left hemisphere 127.2
2529 Female, age 94, left hemisphere 119.7
2621 Female, age 67, right hemisphere 119.6
1855 Male, age 76, left hemisphere 118.8
2148 Female, age 91, left hemisphere 115.4
1911 Female, age 85, right hemisphere 114.1
Dentate gyrus
nTPM: 118.2
2530 Female, age 94, left hemisphere 128.9
2010 Male, age 76, both hemispheres 122.0
1927 Female, age 91, both hemispheres 119.1
2531 Female, age 67, both hemispheres 114.1
2528 Male, age 74, both hemispheres 113.9
2246 Female, age 85, both hemispheres 111.3
Entorhinal gyrus
nTPM: 118.5
2764 Male, age 80, right hemisphere 120.7
2117 Female, age 91, right hemisphere 120.0
2686 Male, age 75, right hemisphere 119.8
1787 Male, age 76, left hemisphere 118.0
1938 Female, age 85, left hemisphere 116.9
2613 Female, age 94, left hemisphere 116.0
Hippocampus, CA1
nTPM: 121.2
2749 Male, age 80, left hemisphere 142.1
2527 Male, age 74, both hemispheres 120.4
1873 Female, age 85, both hemispheres 119.8
2045 Male, age 76, both hemispheres 113.2
2082 Female, age 91, right hemisphere 110.6
Hippocampus, CA2
nTPM: 119.7
1963 Male, age 80, left hemisphere 130.5
1892 Male, age 76, both hemispheres 123.9
2437 Female, age 94, left hemisphere 121.5
2249 Male, age 74, both hemispheres 115.6
1940 Female, age 85, left hemisphere 114.7
2113 Female, age 91, right hemisphere 112.3
Hippocampus, CA3
nTPM: 116.9
2137 Male, age 80, left hemisphere 122.0
1867 Male, age 76, both hemispheres 120.6
2861 Female, age 67, both hemispheres 117.8
1891 Female, age 85, both hemispheres 116.2
2436 Male, age 74, both hemispheres 114.5
2620 Female, age 94, left hemisphere 110.4
Parahippocampal cortex
nTPM: 114.4
1933 Female, age 85, both hemispheres 118.5
2018 Male, age 76, both hemispheres 117.1
2245 Female, age 91, both hemispheres 116.7
2250 Female, age 67, right hemisphere 115.9
1990 Female, age 91, right hemisphere 114.6
2692 Male, age 74, both hemispheres 114.2
1850 Male, age 80, both hemispheres 113.6
2532 Female, age 72, left hemisphere 112.9
2622 Female, age 67, right hemisphere 112.4
2693 Female, age 94, both hemispheres 108.0
Perirhinal gyrus
nTPM: 113.8
1841 Female, age 85, right hemisphere 115.7
1847 Female, age 91, left hemisphere 115.7
1794 Male, age 80, right hemisphere 114.4
2521 Female, age 94, right hemisphere 112.8
2848 Male, age 76, right hemisphere 110.4
Subiculum
nTPM: 116.8
1901 Male, age 80, both hemispheres 122.3
2042 Male, age 76, both hemispheres 118.5
1977 Female, age 85, both hemispheres 117.8
2619 Male, age 74, both hemispheres 116.4
2438 Female, age 94, left hemisphere 115.5
2729 Female, age 91, right hemisphere 110.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 144.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 144.8
Samples: 197

Max nTPM: 314.4
Min nTPM: 58.9
Std nTPM: 43.5
Median nTPM: 136.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 314.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 278.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 266.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 257.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 255.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 255.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 249.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 247.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 243.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 239.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 231.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 83.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.5
FF:10169-103B7 60 years, female 89.9
FF:10153-102I9 76 years, female 77.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.0
Samples: 4

Max nTPM: 35.9
Min nTPM: 26.4
Sample A Male 30.5
Sample B Male 35.1
Sample C Female 35.9
Sample D Female 26.4
Hippocampal formation
nTPM: 31.4
Samples: 4

Max nTPM: 34.1
Min nTPM: 28.6
Sample A Male 33.5
Sample B Male 28.6
Sample C Female 29.2
Sample D Female 34.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
69854175 Antisense, RP_050324_04_C07, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.