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RPS19BP1
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  • RPS19BP1
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:122.2 nTPM
HPA:122.2 nTPM
GTEx:144.6 nTPM
FANTOM5:67.1 Scaled Tags Per Million
Mouse:37.2 nTPM
Allen mouse:1.5 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 122.2
Sample id Sample description nTPM
Amygdala
nTPM: 121.7
2695 Female, age 67, right hemisphere 128.2
2514 Male, age 75, right hemisphere 123.3
2517 Female, age 94, left hemisphere 120.4
2814 Male, age 76, right hemisphere 120.3
1987 Female, age 91, left hemisphere 116.4
Basal amygdala
nTPM: 118.1
2609 Male, age 75, right hemisphere 126.5
1955 Male, age 76, both hemispheres 118.1
2827 Female, age 67, right hemisphere 117.5
2243 Female, age 91, right hemisphere 116.3
2110 Male, age 80, left hemisphere 115.7
2685 Female, age 94, left hemisphere 114.7
Central amygdala
nTPM: 122.2
2826 Female, age 94, left hemisphere 135.4
1905 Male, age 76, both hemispheres 123.9
2515 Male, age 75, right hemisphere 122.5
2239 Male, age 80, left hemisphere 117.0
2701 Female, age 91, right hemisphere 112.2
Corticomedial amygdala
nTPM: 116.0
2428 Male, age 75, right hemisphere 123.8
2829 Male, age 80, left hemisphere 118.8
2429 Female, age 94, left hemisphere 114.3
2535 Female, age 67, right hemisphere 113.9
2242 Female, age 91, right hemisphere 113.1
2240 Male, age 76, both hemispheres 112.1
Lateral amygdala
nTPM: 120.1
2534 Female, age 94, left hemisphere 124.6
2516 Male, age 75, right hemisphere 124.3
2830 Female, age 67, right hemisphere 122.4
1883 Male, age 76, both hemispheres 121.1
2256 Male, age 80, left hemisphere 115.1
2255 Female, age 91, right hemisphere 113.3
Stria terminalis, bed nucleus
nTPM: 112.5
1974 Female, age 91, both hemispheres 114.4
2201 Male, age 74, unknown 111.9
2486 Female, age 94, both hemispheres 111.3

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 144.6
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 144.6
Samples: 152

Max nTPM: 479.2
Min nTPM: 64.4
Std nTPM: 56.0
Median nTPM: 134.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 479.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 350.7
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 300.2
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 296.9
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 296.6
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 282.5
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 272.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 248.9
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 240.2
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 236.1
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 230.1
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 223.9
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 222.9
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 206.7
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 204.8
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 196.5
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 192.5
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 192.2
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 187.6
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 186.5
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 185.8
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 185.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 181.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 180.6
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 179.3
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 176.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 175.8
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 174.0
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 171.1
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 171.0
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 170.7
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 170.3
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 169.5
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 169.5
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 168.8
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 167.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 167.3
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 166.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 162.6
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 161.6
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 160.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 159.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 159.0
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 158.6
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 158.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 157.8
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 156.0
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 156.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 155.8
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 155.3
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 154.8
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 154.8
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 154.3
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 153.6
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 150.9
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 150.6
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 150.0
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 149.3
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 148.1
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 146.1
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 144.3
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 144.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 143.4
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 143.4
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 143.3
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 143.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 141.7
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 141.2
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 140.8
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 139.8
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 138.8
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 137.8
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 137.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 135.9
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 135.8
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 134.1
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 133.9
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 132.8
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 132.3
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 131.5
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 131.2
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 130.1
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 130.0
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 128.7
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 128.4
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 127.6
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 127.1
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 127.1
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 127.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 125.0
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 124.5
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 124.3
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 123.5
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 123.5
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 122.7
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 122.5
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 122.4
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 121.1
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 121.0
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 119.7
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 118.7
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 117.0
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 116.1
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 115.8
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 115.2
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 114.6
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 114.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 114.2
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 113.7
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 112.9
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 112.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 111.9
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 111.5
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 109.9
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 109.3
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 108.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 107.7
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 106.6
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 106.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 106.5
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 105.4
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 104.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 104.5
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 103.9
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 103.6
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 102.8
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 102.0
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 101.5
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 99.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 99.2
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 98.1
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 96.3
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 93.4
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 93.4
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 90.8
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 90.1
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 88.9
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 87.2
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 86.2
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 84.9
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 84.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 84.0
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 81.3
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 80.9
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 80.7
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 79.4
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 78.5
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 78.0
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 74.9
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 68.2
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 66.4
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 64.4
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 67.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 67.1
FF:10151-102I7 76 years, female 67.1

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 37.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 37.2
Samples: 4

Max nTPM: 38.2
Min nTPM: 35.6
Sample A Male 38.0
Sample B Male 37.0
Sample C Female 35.6
Sample D Female 38.2

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 1.5
69854175 Antisense, RP_050324_04_C07, Mouse strain C57BL/6J (56 days, male) 1.5

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