HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:28.7 nTPM
HPA:28.7 nTPM
GTEx:20.6 nTPM
FANTOM5:26.2 Scaled Tags Per Million
Pig:36.0 nTPM
Mouse:49.8 nTPM
Allen mouse:14.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.7
Sample id Sample description nTPM
Hippocampus
nTPM: 22.9
2148 Female, age 91, left hemisphere 39.1
1855 Male, age 76, left hemisphere 38.9
1898 Male, age 80, left hemisphere 38.0
2621 Female, age 67, right hemisphere 19.9
1911 Female, age 85, right hemisphere 1.5
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 26.0
2531 Female, age 67, both hemispheres 60.2
2010 Male, age 76, both hemispheres 23.5
2528 Male, age 74, both hemispheres 23.2
1927 Female, age 91, both hemispheres 21.2
2246 Female, age 85, both hemispheres 18.1
2530 Female, age 94, left hemisphere 9.9
Entorhinal gyrus
nTPM: 26.7
2613 Female, age 94, left hemisphere 50.8
2764 Male, age 80, right hemisphere 41.0
1938 Female, age 85, left hemisphere 29.6
2686 Male, age 75, right hemisphere 17.7
1787 Male, age 76, left hemisphere 17.2
2117 Female, age 91, right hemisphere 4.0
Hippocampus, CA1
nTPM: 27.2
2045 Male, age 76, both hemispheres 40.5
2749 Male, age 80, left hemisphere 39.6
1873 Female, age 85, both hemispheres 32.6
2082 Female, age 91, right hemisphere 13.1
2527 Male, age 74, both hemispheres 10.1
Hippocampus, CA2
nTPM: 11.5
1963 Male, age 80, left hemisphere 24.1
1892 Male, age 76, both hemispheres 19.7
2437 Female, age 94, left hemisphere 13.0
2113 Female, age 91, right hemisphere 8.5
1940 Female, age 85, left hemisphere 2.3
2249 Male, age 74, both hemispheres 1.3
Hippocampus, CA3
nTPM: 28.2
2620 Female, age 94, left hemisphere 52.8
2861 Female, age 67, both hemispheres 51.7
2137 Male, age 80, left hemisphere 33.6
1891 Female, age 85, both hemispheres 14.8
1867 Male, age 76, both hemispheres 11.4
2436 Male, age 74, both hemispheres 5.3
Parahippocampal cortex
nTPM: 18.1
1850 Male, age 80, both hemispheres 30.3
1990 Female, age 91, right hemisphere 25.4
2622 Female, age 67, right hemisphere 22.9
2532 Female, age 72, left hemisphere 22.6
2245 Female, age 91, both hemispheres 16.1
2692 Male, age 74, both hemispheres 15.7
1933 Female, age 85, both hemispheres 15.5
2693 Female, age 94, both hemispheres 13.8
2250 Female, age 67, right hemisphere 12.4
2018 Male, age 76, both hemispheres 6.7
Perirhinal gyrus
nTPM: 28.7
1847 Female, age 91, left hemisphere 51.1
1794 Male, age 80, right hemisphere 33.5
2848 Male, age 76, right hemisphere 22.5
2521 Female, age 94, right hemisphere 20.7
1841 Female, age 85, right hemisphere 15.6
Subiculum
nTPM: 13.9
2729 Female, age 91, right hemisphere 27.1
1977 Female, age 85, both hemispheres 20.5
1901 Male, age 80, both hemispheres 17.1
2438 Female, age 94, left hemisphere 9.4
2619 Male, age 74, both hemispheres 8.0
2042 Male, age 76, both hemispheres 1.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.6
Samples: 197

Max nTPM: 90.5
Min nTPM: 0.7
Std nTPM: 15.4
Median nTPM: 17.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 90.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 74.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 63.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 59.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 58.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 52.7
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 52.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 52.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 48.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 48.5
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 48.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.2
FF:10169-103B7 60 years, female 36.6
FF:10153-102I9 76 years, female 15.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.0
Samples: 4

Max nTPM: 53.1
Min nTPM: 18.3
Sample A Female 53.1
Sample B Female 42.7
Sample C Male 18.3
Sample D Male 29.8
Entorhinal cortex
nTPM: 19.6
Samples: 4

Max nTPM: 22.0
Min nTPM: 17.3
Sample A Female 17.4
Sample B Female 17.3
Sample C Male 22.0
Sample D Male 21.6
Subiculum
nTPM: 24.0
Samples: 4

Max nTPM: 33.7
Min nTPM: 17.7
Sample A Female 33.7
Sample B Female 20.2
Sample C Male 24.4
Sample D Male 17.7
Ventral hippocampus
nTPM: 30.1
Samples: 4

Max nTPM: 38.0
Min nTPM: 15.4
Sample A Female 38.0
Sample B Female 15.4
Sample C Male 36.0
Sample D Male 31.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 28.2
Min nTPM: 13.0
Sample A Male 18.4
Sample B Male 13.0
Sample C Female 28.2
Sample D Female 25.4
Hippocampal formation
nTPM: 49.8
Samples: 4

Max nTPM: 62.4
Min nTPM: 32.9
Sample A Male 32.9
Sample B Male 60.1
Sample C Female 62.4
Sample D Female 43.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.0
73788105 Antisense, RP_051213_01_A11, Mouse strain C57BL/6J (56 days, male) 14.8
69874126 Antisense, RP_050512_02_F12, Mouse strain C57BL/6J (56 days, male) 13.2

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