HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:35.6 nTPM
HPA:35.6 nTPM
GTEx:36.4 nTPM
FANTOM5:11.9 Scaled Tags Per Million
Pig:21.8 nTPM
Mouse:23.4 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.6
Sample id Sample description nTPM
Hippocampus
nTPM: 16.5
1855 Male, age 76, left hemisphere 20.0
1898 Male, age 80, left hemisphere 19.6
2529 Female, age 94, left hemisphere 18.1
2621 Female, age 67, right hemisphere 15.6
1911 Female, age 85, right hemisphere 13.2
2148 Female, age 91, left hemisphere 12.4
Dentate gyrus
nTPM: 18.6
2246 Female, age 85, both hemispheres 25.5
2530 Female, age 94, left hemisphere 25.0
2010 Male, age 76, both hemispheres 19.1
2528 Male, age 74, both hemispheres 15.7
2531 Female, age 67, both hemispheres 14.4
1927 Female, age 91, both hemispheres 11.9
Entorhinal gyrus
nTPM: 35.6
2613 Female, age 94, left hemisphere 54.4
2764 Male, age 80, right hemisphere 46.7
1787 Male, age 76, left hemisphere 33.0
2686 Male, age 75, right hemisphere 29.4
1938 Female, age 85, left hemisphere 28.0
2117 Female, age 91, right hemisphere 22.0
Hippocampus, CA1
nTPM: 16.9
2082 Female, age 91, right hemisphere 19.5
2045 Male, age 76, both hemispheres 19.2
2527 Male, age 74, both hemispheres 17.5
1873 Female, age 85, both hemispheres 14.3
2749 Male, age 80, left hemisphere 13.8
Hippocampus, CA2
nTPM: 19.5
2437 Female, age 94, left hemisphere 25.7
1940 Female, age 85, left hemisphere 23.2
1892 Male, age 76, both hemispheres 19.9
2249 Male, age 74, both hemispheres 17.1
2113 Female, age 91, right hemisphere 16.4
1963 Male, age 80, left hemisphere 14.5
Hippocampus, CA3
nTPM: 12.6
1867 Male, age 76, both hemispheres 17.7
2861 Female, age 67, both hemispheres 14.9
1891 Female, age 85, both hemispheres 14.2
2137 Male, age 80, left hemisphere 13.7
2436 Male, age 74, both hemispheres 9.4
2620 Female, age 94, left hemisphere 5.5
Parahippocampal cortex
nTPM: 27.6
2532 Female, age 72, left hemisphere 32.1
1933 Female, age 85, both hemispheres 32.0
1850 Male, age 80, both hemispheres 30.7
2693 Female, age 94, both hemispheres 29.5
2018 Male, age 76, both hemispheres 29.2
2622 Female, age 67, right hemisphere 28.2
2692 Male, age 74, both hemispheres 26.9
1990 Female, age 91, right hemisphere 24.8
2245 Female, age 91, both hemispheres 22.7
2250 Female, age 67, right hemisphere 20.1
Perirhinal gyrus
nTPM: 33.0
2521 Female, age 94, right hemisphere 48.8
1794 Male, age 80, right hemisphere 36.1
1847 Female, age 91, left hemisphere 28.7
2848 Male, age 76, right hemisphere 27.8
1841 Female, age 85, right hemisphere 23.5
Subiculum
nTPM: 23.5
1977 Female, age 85, both hemispheres 31.5
2619 Male, age 74, both hemispheres 25.2
2438 Female, age 94, left hemisphere 24.2
1901 Male, age 80, both hemispheres 22.4
2042 Male, age 76, both hemispheres 20.9
2729 Female, age 91, right hemisphere 16.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.4
Samples: 197

Max nTPM: 114.2
Min nTPM: 3.3
Std nTPM: 16.0
Median nTPM: 35.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 114.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 92.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 88.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 81.0
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 76.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 75.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 72.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 71.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 67.0
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 66.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 63.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.9
FF:10153-102I9 76 years, female 13.3
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.3
Sample A Female 8.0
Sample B Female 8.0
Sample C Male 6.3
Sample D Male 6.9
Entorhinal cortex
nTPM: 21.8
Samples: 4

Max nTPM: 25.5
Min nTPM: 16.9
Sample A Female 20.9
Sample B Female 25.5
Sample C Male 23.9
Sample D Male 16.9
Subiculum
nTPM: 10.7
Samples: 4

Max nTPM: 15.3
Min nTPM: 7.4
Sample A Female 15.3
Sample B Female 9.1
Sample C Male 7.4
Sample D Male 11.1
Ventral hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 13.0
Min nTPM: 7.1
Sample A Female 11.8
Sample B Female 9.0
Sample C Male 13.0
Sample D Male 7.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 22.7
Min nTPM: 15.7
Sample A Male 22.7
Sample B Male 21.7
Sample C Female 21.4
Sample D Female 15.7
Hippocampal formation
nTPM: 23.4
Samples: 4

Max nTPM: 29.9
Min nTPM: 15.0
Sample A Male 23.2
Sample B Male 29.9
Sample C Female 15.0
Sample D Female 25.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
77869820 Antisense, RP_070212_02_D05, Mouse strain C57BL/6J (56 days, male) 7.9
72128753 Antisense, RP_051017_04_C09, Mouse strain C57BL/6J (56 days, male) 7.8
69407385 Antisense, RP_050414_01_E09, Mouse strain C57BL/6J (56 days, male) 6.9

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The Human Protein Atlas

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