HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:5.1 nTPM
HPA:5.1 nTPM
GTEx:10.8 nTPM
FANTOM5:5.9 Scaled Tags Per Million
Pig:3.6 nTPM
Mouse:4.0 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 5.1
Sample id Sample description nTPM
Hippocampus
nTPM: 3.2
2529 Female, age 94, left hemisphere 7.9
1911 Female, age 85, right hemisphere 6.3
2621 Female, age 67, right hemisphere 2.9
1898 Male, age 80, left hemisphere 1.0
2148 Female, age 91, left hemisphere 0.7
1855 Male, age 76, left hemisphere 0.3
Dentate gyrus
nTPM: 1.6
2246 Female, age 85, both hemispheres 2.9
1927 Female, age 91, both hemispheres 2.3
2528 Male, age 74, both hemispheres 2.0
2531 Female, age 67, both hemispheres 1.6
2010 Male, age 76, both hemispheres 0.5
2530 Female, age 94, left hemisphere 0.2
Entorhinal gyrus
nTPM: 0.4
2117 Female, age 91, right hemisphere 0.9
1787 Male, age 76, left hemisphere 0.7
1938 Female, age 85, left hemisphere 0.5
2686 Male, age 75, right hemisphere 0.3
2764 Male, age 80, right hemisphere 0.2
2613 Female, age 94, left hemisphere 0.0
Hippocampus, CA1
nTPM: 5.1
2749 Male, age 80, left hemisphere 9.2
2082 Female, age 91, right hemisphere 8.2
2527 Male, age 74, both hemispheres 6.9
1873 Female, age 85, both hemispheres 1.5
2045 Male, age 76, both hemispheres 0.0
Hippocampus, CA2
nTPM: 4.8
2113 Female, age 91, right hemisphere 9.1
2249 Male, age 74, both hemispheres 8.1
1940 Female, age 85, left hemisphere 7.9
2437 Female, age 94, left hemisphere 1.9
1892 Male, age 76, both hemispheres 1.5
1963 Male, age 80, left hemisphere 0.2
Hippocampus, CA3
nTPM: 3.1
2137 Male, age 80, left hemisphere 11.1
2436 Male, age 74, both hemispheres 3.1
1867 Male, age 76, both hemispheres 2.4
1891 Female, age 85, both hemispheres 1.7
2861 Female, age 67, both hemispheres 0.6
2620 Female, age 94, left hemisphere 0.0
Parahippocampal cortex
nTPM: 2.8
2250 Female, age 67, right hemisphere 6.8
2245 Female, age 91, both hemispheres 5.5
2018 Male, age 76, both hemispheres 5.1
1933 Female, age 85, both hemispheres 4.3
2622 Female, age 67, right hemisphere 2.3
2532 Female, age 72, left hemisphere 1.6
1850 Male, age 80, both hemispheres 1.1
1990 Female, age 91, right hemisphere 1.1
2692 Male, age 74, both hemispheres 0.4
2693 Female, age 94, both hemispheres 0.0
Perirhinal gyrus
nTPM: 2.5
2521 Female, age 94, right hemisphere 6.3
1847 Female, age 91, left hemisphere 3.8
1794 Male, age 80, right hemisphere 1.8
1841 Female, age 85, right hemisphere 0.9
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 2.2
1901 Male, age 80, both hemispheres 4.7
2438 Female, age 94, left hemisphere 2.8
2042 Male, age 76, both hemispheres 2.5
2619 Male, age 74, both hemispheres 1.4
2729 Female, age 91, right hemisphere 1.4
1977 Female, age 85, both hemispheres 0.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.8
Samples: 197

Max nTPM: 48.5
Min nTPM: 0.3
Std nTPM: 9.2
Median nTPM: 8.1
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 48.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 40.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 40.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 37.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 35.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 34.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 32.8
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 30.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 30.5
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 29.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 29.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 5.9
FF:10169-103B7 60 years, female 7.3
FF:10153-102I9 76 years, female 4.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.0
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.2
Sample A Female 2.1
Sample B Female 2.3
Sample C Male 2.3
Sample D Male 1.2
Entorhinal cortex
nTPM: 2.7
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.0
Sample A Female 3.0
Sample B Female 2.0
Sample C Male 3.7
Sample D Male 2.0
Subiculum
nTPM: 3.6
Samples: 4

Max nTPM: 5.2
Min nTPM: 2.8
Sample A Female 5.2
Sample B Female 2.8
Sample C Male 3.5
Sample D Male 2.8
Ventral hippocampus
nTPM: 2.7
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.2
Sample A Female 2.4
Sample B Female 2.5
Sample C Male 3.7
Sample D Male 2.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.4
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.2
Sample A Male 0.3
Sample B Male 0.2
Sample C Female 0.8
Sample D Female 0.4
Hippocampal formation
nTPM: 4.0
Samples: 4

Max nTPM: 8.9
Min nTPM: 0.3
Sample A Male 0.3
Sample B Male 1.9
Sample C Female 4.8
Sample D Female 8.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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