HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.1 nTPM
HPA:51.1 nTPM
GTEx:27.0 nTPM
FANTOM5:179.3 Scaled Tags Per Million
Mouse:26.6 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055907Antibody CAB011507
Glial cells MediumHigh
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.1
Sample id Sample description nTPM
Hippocampus
nTPM: 51.1
2529 Female, age 94, left hemisphere 60.1
1855 Male, age 76, left hemisphere 52.8
1898 Male, age 80, left hemisphere 50.9
2621 Female, age 67, right hemisphere 50.9
1911 Female, age 85, right hemisphere 48.7
2148 Female, age 91, left hemisphere 43.0
Dentate gyrus
nTPM: 43.0
2531 Female, age 67, both hemispheres 46.3
2010 Male, age 76, both hemispheres 45.7
2528 Male, age 74, both hemispheres 44.6
2246 Female, age 85, both hemispheres 44.3
2530 Female, age 94, left hemisphere 43.0
1927 Female, age 91, both hemispheres 34.1
Entorhinal gyrus
nTPM: 46.6
2117 Female, age 91, right hemisphere 53.8
1938 Female, age 85, left hemisphere 53.5
2764 Male, age 80, right hemisphere 49.7
1787 Male, age 76, left hemisphere 48.6
2686 Male, age 75, right hemisphere 38.2
2613 Female, age 94, left hemisphere 36.1
Hippocampus, CA1
nTPM: 47.2
2527 Male, age 74, both hemispheres 64.0
1873 Female, age 85, both hemispheres 46.6
2082 Female, age 91, right hemisphere 44.0
2749 Male, age 80, left hemisphere 41.2
2045 Male, age 76, both hemispheres 40.0
Hippocampus, CA2
nTPM: 45.9
2249 Male, age 74, both hemispheres 65.2
1940 Female, age 85, left hemisphere 49.8
1963 Male, age 80, left hemisphere 45.7
2113 Female, age 91, right hemisphere 45.1
2437 Female, age 94, left hemisphere 42.4
1892 Male, age 76, both hemispheres 27.1
Hippocampus, CA3
nTPM: 44.1
2436 Male, age 74, both hemispheres 65.8
2861 Female, age 67, both hemispheres 51.1
1891 Female, age 85, both hemispheres 45.7
1867 Male, age 76, both hemispheres 34.6
2620 Female, age 94, left hemisphere 34.0
2137 Male, age 80, left hemisphere 33.3
Parahippocampal cortex
nTPM: 46.0
2250 Female, age 67, right hemisphere 55.6
1933 Female, age 85, both hemispheres 52.7
2245 Female, age 91, both hemispheres 48.5
2018 Male, age 76, both hemispheres 47.9
2532 Female, age 72, left hemisphere 45.9
1850 Male, age 80, both hemispheres 45.2
1990 Female, age 91, right hemisphere 44.6
2622 Female, age 67, right hemisphere 41.4
2693 Female, age 94, both hemispheres 41.2
2692 Male, age 74, both hemispheres 37.4
Perirhinal gyrus
nTPM: 45.5
1841 Female, age 85, right hemisphere 49.1
1794 Male, age 80, right hemisphere 49.0
2521 Female, age 94, right hemisphere 47.8
1847 Female, age 91, left hemisphere 46.2
2848 Male, age 76, right hemisphere 35.7
Subiculum
nTPM: 48.7
2042 Male, age 76, both hemispheres 61.2
2619 Male, age 74, both hemispheres 53.4
1977 Female, age 85, both hemispheres 47.1
2438 Female, age 94, left hemisphere 45.6
1901 Male, age 80, both hemispheres 43.4
2729 Female, age 91, right hemisphere 41.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.0
Samples: 197

Max nTPM: 199.4
Min nTPM: 6.5
Std nTPM: 20.2
Median nTPM: 21.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 199.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 98.0
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 95.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 73.2
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 70.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 69.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 68.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 65.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 64.1
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 63.0
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 61.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 179.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 179.3
FF:10153-102I9 76 years, female 216.3
FF:10169-103B7 60 years, female 142.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.7
Samples: 4

Max nTPM: 25.8
Min nTPM: 15.2
Sample A Male 18.9
Sample B Male 15.2
Sample C Female 25.8
Sample D Female 19.0
Hippocampal formation
nTPM: 26.6
Samples: 4

Max nTPM: 32.4
Min nTPM: 20.2
Sample A Male 22.5
Sample B Male 20.2
Sample C Female 32.4
Sample D Female 31.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69735030 Antisense, RP_050503_01_H09, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.