HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Neuronal projections: Not detected
Synapses: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:72.3 nTPM
HPA:72.3 nTPM
GTEx:80.0 nTPM
FANTOM5:139.1 Scaled Tags Per Million
Pig:47.7 nTPM
Mouse:112.9 nTPM
Allen mouse:7.7 Expression energy

HIPPOCAMPUS - Extended tissue profilei , antibody HPA017320
Glial cells Not detected
Neuronal cells Low
Neuronal projections Not detected
Synapses Low

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017320
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.3
Sample id Sample description nTPM
Hippocampus
nTPM: 63.9
1898 Male, age 80, left hemisphere 68.3
2529 Female, age 94, left hemisphere 68.1
1911 Female, age 85, right hemisphere 67.6
2621 Female, age 67, right hemisphere 67.6
1855 Male, age 76, left hemisphere 59.3
2148 Female, age 91, left hemisphere 52.5
Dentate gyrus
nTPM: 66.0
2528 Male, age 74, both hemispheres 81.1
2530 Female, age 94, left hemisphere 80.6
2010 Male, age 76, both hemispheres 72.4
2246 Female, age 85, both hemispheres 59.5
1927 Female, age 91, both hemispheres 52.9
2531 Female, age 67, both hemispheres 49.7
Entorhinal gyrus
nTPM: 59.8
2117 Female, age 91, right hemisphere 82.8
2764 Male, age 80, right hemisphere 61.8
1787 Male, age 76, left hemisphere 61.0
1938 Female, age 85, left hemisphere 57.6
2613 Female, age 94, left hemisphere 53.4
2686 Male, age 75, right hemisphere 42.3
Hippocampus, CA1
nTPM: 66.5
2527 Male, age 74, both hemispheres 76.3
2082 Female, age 91, right hemisphere 68.2
1873 Female, age 85, both hemispheres 65.8
2749 Male, age 80, left hemisphere 65.8
2045 Male, age 76, both hemispheres 56.6
Hippocampus, CA2
nTPM: 72.3
2249 Male, age 74, both hemispheres 119.9
2437 Female, age 94, left hemisphere 70.2
1963 Male, age 80, left hemisphere 66.4
1940 Female, age 85, left hemisphere 65.1
2113 Female, age 91, right hemisphere 58.5
1892 Male, age 76, both hemispheres 53.5
Hippocampus, CA3
nTPM: 61.2
2436 Male, age 74, both hemispheres 98.1
1891 Female, age 85, both hemispheres 67.8
1867 Male, age 76, both hemispheres 60.2
2137 Male, age 80, left hemisphere 51.7
2620 Female, age 94, left hemisphere 50.2
2861 Female, age 67, both hemispheres 39.5
Parahippocampal cortex
nTPM: 58.0
2250 Female, age 67, right hemisphere 76.8
1990 Female, age 91, right hemisphere 66.3
2018 Male, age 76, both hemispheres 63.2
1933 Female, age 85, both hemispheres 59.4
2245 Female, age 91, both hemispheres 57.2
2532 Female, age 72, left hemisphere 55.6
2692 Male, age 74, both hemispheres 55.2
1850 Male, age 80, both hemispheres 53.3
2693 Female, age 94, both hemispheres 52.1
2622 Female, age 67, right hemisphere 40.5
Perirhinal gyrus
nTPM: 55.6
1847 Female, age 91, left hemisphere 60.0
1794 Male, age 80, right hemisphere 59.1
2521 Female, age 94, right hemisphere 58.6
1841 Female, age 85, right hemisphere 52.5
2848 Male, age 76, right hemisphere 47.8
Subiculum
nTPM: 68.5
1977 Female, age 85, both hemispheres 78.5
2619 Male, age 74, both hemispheres 71.2
1901 Male, age 80, both hemispheres 69.6
2042 Male, age 76, both hemispheres 69.2
2729 Female, age 91, right hemisphere 64.4
2438 Female, age 94, left hemisphere 58.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 80.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 80.0
Samples: 197

Max nTPM: 145.5
Min nTPM: 33.4
Std nTPM: 17.7
Median nTPM: 79.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 145.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 123.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 114.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 114.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 114.1
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 113.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 113.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 112.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 110.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 108.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 107.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 139.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 139.1
FF:10153-102I9 76 years, female 164.3
FF:10169-103B7 60 years, female 114.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.4
Samples: 4

Max nTPM: 49.8
Min nTPM: 30.1
Sample A Female 49.8
Sample B Female 42.0
Sample C Male 43.5
Sample D Male 30.1
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 35.8
Min nTPM: 25.4
Sample A Female 34.7
Sample B Female 35.8
Sample C Male 35.0
Sample D Male 25.4
Subiculum
nTPM: 47.7
Samples: 4

Max nTPM: 64.1
Min nTPM: 37.9
Sample A Female 64.1
Sample B Female 43.3
Sample C Male 45.5
Sample D Male 37.9
Ventral hippocampus
nTPM: 39.0
Samples: 4

Max nTPM: 50.6
Min nTPM: 27.1
Sample A Female 31.6
Sample B Female 27.1
Sample C Male 46.5
Sample D Male 50.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 112.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 113.0
Samples: 4

Max nTPM: 158.5
Min nTPM: 88.3
Sample A Male 96.9
Sample B Male 88.3
Sample C Female 108.1
Sample D Female 158.5
Hippocampal formation
nTPM: 88.5
Samples: 4

Max nTPM: 90.4
Min nTPM: 86.2
Sample A Male 89.7
Sample B Male 87.7
Sample C Female 86.2
Sample D Female 90.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
1700 Antisense, RP_040526_02_D07, Mouse strain C57BL/6J (56 days, male) 7.7
1699 Antisense, RP_040526_02_D07, Mouse strain C57BL/6J (56 days, male) 7.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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