HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Neuronal cells: Low
Neuronal projections: Not detected
Synapses: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:29.7 nTPM
HPA:29.7 nTPM
GTEx:39.0 nTPM
FANTOM5:90.2 Scaled Tags Per Million
Pig:34.6 nTPM

HIPPOCAMPUS - Extended tissue profilei , antibody HPA050902
Glial cells Not detected
Neuronal cells Low
Neuronal projections Not detected
Synapses Not detected

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.7
Sample id Sample description nTPM
Hippocampus
nTPM: 22.8
2621 Female, age 67, right hemisphere 25.3
2148 Female, age 91, left hemisphere 23.1
1911 Female, age 85, right hemisphere 23.0
1855 Male, age 76, left hemisphere 22.3
2529 Female, age 94, left hemisphere 22.3
1898 Male, age 80, left hemisphere 20.9
Dentate gyrus
nTPM: 27.9
2531 Female, age 67, both hemispheres 40.0
2246 Female, age 85, both hemispheres 30.9
1927 Female, age 91, both hemispheres 28.9
2530 Female, age 94, left hemisphere 25.4
2528 Male, age 74, both hemispheres 22.3
2010 Male, age 76, both hemispheres 19.9
Entorhinal gyrus
nTPM: 4.4
2117 Female, age 91, right hemisphere 7.5
1787 Male, age 76, left hemisphere 6.1
1938 Female, age 85, left hemisphere 3.9
2764 Male, age 80, right hemisphere 3.8
2686 Male, age 75, right hemisphere 3.0
2613 Female, age 94, left hemisphere 2.2
Hippocampus, CA1
nTPM: 27.7
2045 Male, age 76, both hemispheres 34.6
2082 Female, age 91, right hemisphere 28.9
2749 Male, age 80, left hemisphere 28.8
1873 Female, age 85, both hemispheres 24.0
2527 Male, age 74, both hemispheres 22.2
Hippocampus, CA2
nTPM: 15.5
2113 Female, age 91, right hemisphere 21.9
2249 Male, age 74, both hemispheres 18.8
1963 Male, age 80, left hemisphere 16.1
1892 Male, age 76, both hemispheres 16.0
1940 Female, age 85, left hemisphere 10.1
2437 Female, age 94, left hemisphere 10.1
Hippocampus, CA3
nTPM: 29.7
2620 Female, age 94, left hemisphere 64.8
2861 Female, age 67, both hemispheres 33.9
2137 Male, age 80, left hemisphere 32.0
2436 Male, age 74, both hemispheres 17.0
1867 Male, age 76, both hemispheres 16.5
1891 Female, age 85, both hemispheres 13.8
Parahippocampal cortex
nTPM: 8.1
2245 Female, age 91, both hemispheres 20.9
2250 Female, age 67, right hemisphere 16.7
1933 Female, age 85, both hemispheres 13.8
2018 Male, age 76, both hemispheres 13.7
2693 Female, age 94, both hemispheres 5.7
2622 Female, age 67, right hemisphere 2.9
1990 Female, age 91, right hemisphere 2.8
1850 Male, age 80, both hemispheres 1.6
2532 Female, age 72, left hemisphere 1.6
2692 Male, age 74, both hemispheres 1.6
Perirhinal gyrus
nTPM: 8.8
1847 Female, age 91, left hemisphere 15.9
2521 Female, age 94, right hemisphere 15.4
1794 Male, age 80, right hemisphere 4.8
2848 Male, age 76, right hemisphere 4.3
1841 Female, age 85, right hemisphere 3.6
Subiculum
nTPM: 9.9
2729 Female, age 91, right hemisphere 16.3
1977 Female, age 85, both hemispheres 13.0
1901 Male, age 80, both hemispheres 12.2
2042 Male, age 76, both hemispheres 11.1
2619 Male, age 74, both hemispheres 4.3
2438 Female, age 94, left hemisphere 2.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.0
Samples: 197

Max nTPM: 140.3
Min nTPM: 1.0
Std nTPM: 29.9
Median nTPM: 31.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 140.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 128.4
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 125.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 120.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 109.6
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 109.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 105.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 105.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 103.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 102.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 102.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.2
FF:10169-103B7 60 years, female 152.7
FF:10153-102I9 76 years, female 27.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.7
Samples: 4

Max nTPM: 41.8
Min nTPM: 20.0
Sample A Female 41.8
Sample B Female 34.8
Sample C Male 20.0
Sample D Male 22.0
Entorhinal cortex
nTPM: 31.9
Samples: 4

Max nTPM: 35.9
Min nTPM: 28.4
Sample A Female 35.9
Sample B Female 29.2
Sample C Male 33.9
Sample D Male 28.4
Subiculum
nTPM: 34.5
Samples: 4

Max nTPM: 42.4
Min nTPM: 29.0
Sample A Female 42.4
Sample B Female 31.5
Sample C Male 35.2
Sample D Male 29.0
Ventral hippocampus
nTPM: 34.6
Samples: 4

Max nTPM: 42.9
Min nTPM: 23.7
Sample A Female 30.6
Sample B Female 23.7
Sample C Male 42.9
Sample D Male 41.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.