HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:29.2 nTPM
HPA:29.2 nTPM
GTEx:35.6 nTPM
FANTOM5:53.3 Scaled Tags Per Million
Pig:60.2 nTPM
Mouse:43.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.2
Sample id Sample description nTPM
Hippocampus
nTPM: 21.7
1911 Female, age 85, right hemisphere 24.8
1898 Male, age 80, left hemisphere 22.9
1855 Male, age 76, left hemisphere 22.5
2621 Female, age 67, right hemisphere 20.9
2148 Female, age 91, left hemisphere 20.2
2529 Female, age 94, left hemisphere 19.2
Dentate gyrus
nTPM: 21.8
2530 Female, age 94, left hemisphere 23.6
2010 Male, age 76, both hemispheres 23.1
1927 Female, age 91, both hemispheres 21.9
2528 Male, age 74, both hemispheres 21.7
2531 Female, age 67, both hemispheres 21.4
2246 Female, age 85, both hemispheres 19.1
Entorhinal gyrus
nTPM: 29.2
1938 Female, age 85, left hemisphere 33.8
2764 Male, age 80, right hemisphere 32.7
2613 Female, age 94, left hemisphere 32.2
1787 Male, age 76, left hemisphere 28.2
2117 Female, age 91, right hemisphere 24.7
2686 Male, age 75, right hemisphere 23.4
Hippocampus, CA1
nTPM: 21.5
2749 Male, age 80, left hemisphere 25.4
2045 Male, age 76, both hemispheres 24.2
1873 Female, age 85, both hemispheres 22.1
2527 Male, age 74, both hemispheres 18.3
2082 Female, age 91, right hemisphere 17.4
Hippocampus, CA2
nTPM: 22.0
1892 Male, age 76, both hemispheres 25.2
1963 Male, age 80, left hemisphere 23.0
1940 Female, age 85, left hemisphere 22.4
2249 Male, age 74, both hemispheres 21.0
2113 Female, age 91, right hemisphere 20.3
2437 Female, age 94, left hemisphere 20.2
Hippocampus, CA3
nTPM: 22.0
2137 Male, age 80, left hemisphere 27.7
1891 Female, age 85, both hemispheres 27.0
1867 Male, age 76, both hemispheres 25.5
2620 Female, age 94, left hemisphere 19.3
2436 Male, age 74, both hemispheres 16.6
2861 Female, age 67, both hemispheres 16.0
Parahippocampal cortex
nTPM: 24.3
1850 Male, age 80, both hemispheres 31.2
1933 Female, age 85, both hemispheres 30.3
2532 Female, age 72, left hemisphere 26.9
1990 Female, age 91, right hemisphere 26.0
2693 Female, age 94, both hemispheres 25.3
2018 Male, age 76, both hemispheres 23.7
2245 Female, age 91, both hemispheres 23.1
2692 Male, age 74, both hemispheres 22.4
2622 Female, age 67, right hemisphere 17.2
2250 Female, age 67, right hemisphere 17.0
Perirhinal gyrus
nTPM: 27.4
2848 Male, age 76, right hemisphere 32.4
1847 Female, age 91, left hemisphere 27.2
1794 Male, age 80, right hemisphere 26.1
1841 Female, age 85, right hemisphere 25.9
2521 Female, age 94, right hemisphere 25.7
Subiculum
nTPM: 24.6
1977 Female, age 85, both hemispheres 30.0
2042 Male, age 76, both hemispheres 28.5
1901 Male, age 80, both hemispheres 28.3
2619 Male, age 74, both hemispheres 20.6
2438 Female, age 94, left hemisphere 20.2
2729 Female, age 91, right hemisphere 19.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.6
Samples: 197

Max nTPM: 96.9
Min nTPM: 1.9
Std nTPM: 15.5
Median nTPM: 32.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 96.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 95.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 83.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 80.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 78.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 72.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 70.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 67.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 67.2
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 66.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 66.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.3
FF:10153-102I9 76 years, female 62.7
FF:10169-103B7 60 years, female 43.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 48.5
Samples: 4

Max nTPM: 53.4
Min nTPM: 39.1
Sample A Female 53.4
Sample B Female 48.1
Sample C Male 53.2
Sample D Male 39.1
Entorhinal cortex
nTPM: 60.2
Samples: 4

Max nTPM: 66.2
Min nTPM: 54.1
Sample A Female 59.9
Sample B Female 66.2
Sample C Male 60.4
Sample D Male 54.1
Subiculum
nTPM: 51.0
Samples: 4

Max nTPM: 60.1
Min nTPM: 35.8
Sample A Female 56.3
Sample B Female 60.1
Sample C Male 35.8
Sample D Male 51.7
Ventral hippocampus
nTPM: 36.5
Samples: 4

Max nTPM: 42.5
Min nTPM: 26.3
Sample A Female 37.8
Sample B Female 42.5
Sample C Male 26.3
Sample D Male 39.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.3
Samples: 4

Max nTPM: 51.7
Min nTPM: 40.2
Sample A Male 40.2
Sample B Male 41.0
Sample C Female 40.3
Sample D Female 51.7
Hippocampal formation
nTPM: 42.3
Samples: 4

Max nTPM: 47.7
Min nTPM: 36.4
Sample A Male 47.7
Sample B Male 44.8
Sample C Female 40.3
Sample D Female 36.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
73513326 Antisense, RP_051121_01_H05, Mouse strain C57BL/6J (56 days, male) 0.1

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