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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:205.1 nTPM
GTEx:205.1 nTPM
FANTOM5:167.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA042123Antibody HPA048064Antibody CAB037314
Squamous epithelial cells HighHighHigh





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 205.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 205.1
Samples: 156

Max nTPM: 314.3
Min nTPM: 126.8
Std nTPM: 35.4
Median nTPM: 199.7
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 314.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 299.3
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 284.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 282.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 278.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 274.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 271.9
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 263.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 263.2
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 262.7
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 261.2
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 260.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 260.5
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 260.4
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 260.1
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 256.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 255.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 255.3
GTEX-14PKU-1326-SM-6871B 40-49 years, female 251.4
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 250.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 249.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 245.3
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 243.9
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 242.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 239.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 238.8
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 237.8
GTEX-16NPV-2526-SM-6M483 50-59 years, female 237.8
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 237.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 237.5
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 237.4
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 236.5
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 235.7
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 234.9
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 233.6
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 233.0
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 232.0
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 231.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 229.7
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 229.4
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 228.3
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 227.8
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 225.8
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 225.7
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 224.1
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 223.7
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 222.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 222.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 220.8
GTEX-QCQG-1226-SM-48U23 50-59 years, female 220.7
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 220.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 217.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 216.0
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 215.6
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 215.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 215.2
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 214.4
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 213.3
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 213.0
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 210.2
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 209.5
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 209.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 209.1
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 208.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 208.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 208.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 207.9
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 207.8
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 206.8
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 206.7
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 206.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 205.4
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 205.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 203.3
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 202.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 202.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 201.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 200.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 198.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 198.6
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 197.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 197.1
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 196.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 195.8
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 195.6
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 194.6
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 194.6
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 194.5
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 194.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 194.2
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 194.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 193.9
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 193.8
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 193.8
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 192.5
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 191.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 190.9
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 190.8
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 190.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 190.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 189.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 189.9
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 189.6
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 188.9
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 188.8
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 187.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 187.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 187.3
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 187.1
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 186.7
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 184.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 184.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 183.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 182.3
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 182.2
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 181.8
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 181.0
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 180.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 179.0
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 178.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 176.0
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 175.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 174.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 173.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 173.2
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 172.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 172.5
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 171.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 170.8
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 170.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 169.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 168.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 167.0
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 166.9
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 166.5
GTEX-1C475-0526-SM-793AC 40-49 years, female 166.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 165.0
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 164.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 163.3
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 162.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 161.9
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 161.8
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 158.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 156.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 154.5
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 153.9
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 153.7
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 153.1
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 151.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 150.4
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 150.2
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 149.2
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 145.9
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 145.7
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 141.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 126.8
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 167.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 167.0
FF:10204-103F6 68 years, female 167.0

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The Human Protein Atlas project is funded
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