HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:79.8 nTPM
HPA:79.8 nTPM
GTEx:90.6 nTPM
FANTOM5:21.6 Scaled Tags Per Million
Pig:70.9 nTPM
Mouse:112.4 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045841
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 79.8
Sample id Sample description nTPM
Hippocampus
nTPM: 79.8
2529 Female, age 94, left hemisphere 86.7
2148 Female, age 91, left hemisphere 80.0
1911 Female, age 85, right hemisphere 78.9
1855 Male, age 76, left hemisphere 78.1
1898 Male, age 80, left hemisphere 78.0
2621 Female, age 67, right hemisphere 77.4
Dentate gyrus
nTPM: 77.0
2528 Male, age 74, both hemispheres 83.0
2530 Female, age 94, left hemisphere 79.1
2010 Male, age 76, both hemispheres 78.0
2246 Female, age 85, both hemispheres 75.9
2531 Female, age 67, both hemispheres 74.7
1927 Female, age 91, both hemispheres 71.0
Entorhinal gyrus
nTPM: 78.3
2117 Female, age 91, right hemisphere 85.6
2686 Male, age 75, right hemisphere 82.3
1938 Female, age 85, left hemisphere 79.3
1787 Male, age 76, left hemisphere 76.7
2764 Male, age 80, right hemisphere 74.3
2613 Female, age 94, left hemisphere 71.7
Hippocampus, CA1
nTPM: 76.0
2527 Male, age 74, both hemispheres 82.9
1873 Female, age 85, both hemispheres 77.8
2082 Female, age 91, right hemisphere 74.5
2045 Male, age 76, both hemispheres 74.2
2749 Male, age 80, left hemisphere 70.3
Hippocampus, CA2
nTPM: 74.6
2249 Male, age 74, both hemispheres 78.2
1963 Male, age 80, left hemisphere 76.8
2113 Female, age 91, right hemisphere 76.3
2437 Female, age 94, left hemisphere 75.7
1940 Female, age 85, left hemisphere 71.9
1892 Male, age 76, both hemispheres 68.8
Hippocampus, CA3
nTPM: 76.8
2861 Female, age 67, both hemispheres 81.9
1891 Female, age 85, both hemispheres 77.1
2436 Male, age 74, both hemispheres 76.7
1867 Male, age 76, both hemispheres 76.1
2137 Male, age 80, left hemisphere 75.9
2620 Female, age 94, left hemisphere 73.3
Parahippocampal cortex
nTPM: 76.0
2692 Male, age 74, both hemispheres 82.8
2622 Female, age 67, right hemisphere 79.4
2018 Male, age 76, both hemispheres 78.7
2250 Female, age 67, right hemisphere 77.5
1933 Female, age 85, both hemispheres 76.7
1850 Male, age 80, both hemispheres 74.4
1990 Female, age 91, right hemisphere 73.5
2245 Female, age 91, both hemispheres 72.9
2532 Female, age 72, left hemisphere 72.9
2693 Female, age 94, both hemispheres 70.9
Perirhinal gyrus
nTPM: 71.6
1794 Male, age 80, right hemisphere 75.4
1847 Female, age 91, left hemisphere 73.1
1841 Female, age 85, right hemisphere 70.2
2521 Female, age 94, right hemisphere 69.6
2848 Male, age 76, right hemisphere 69.5
Subiculum
nTPM: 77.6
2619 Male, age 74, both hemispheres 85.9
2729 Female, age 91, right hemisphere 82.8
2042 Male, age 76, both hemispheres 77.1
1901 Male, age 80, both hemispheres 73.7
1977 Female, age 85, both hemispheres 73.7
2438 Female, age 94, left hemisphere 72.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 90.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 90.6
Samples: 197

Max nTPM: 309.4
Min nTPM: 33.1
Std nTPM: 42.6
Median nTPM: 80.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 309.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 279.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 239.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 222.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 212.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 207.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 202.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 193.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 178.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 171.3
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 163.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.6
FF:10153-102I9 76 years, female 27.7
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.9
Samples: 4

Max nTPM: 77.1
Min nTPM: 45.0
Sample A Female 77.1
Sample B Female 49.8
Sample C Male 71.6
Sample D Male 45.0
Entorhinal cortex
nTPM: 70.9
Samples: 4

Max nTPM: 83.5
Min nTPM: 57.4
Sample A Female 65.9
Sample B Female 76.8
Sample C Male 83.5
Sample D Male 57.4
Subiculum
nTPM: 65.6
Samples: 4

Max nTPM: 88.1
Min nTPM: 57.0
Sample A Female 88.1
Sample B Female 57.7
Sample C Male 59.4
Sample D Male 57.0
Ventral hippocampus
nTPM: 64.1
Samples: 4

Max nTPM: 80.5
Min nTPM: 55.7
Sample A Female 63.4
Sample B Female 56.9
Sample C Male 80.5
Sample D Male 55.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 112.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 101.7
Samples: 4

Max nTPM: 119.0
Min nTPM: 90.6
Sample A Male 119.0
Sample B Male 98.4
Sample C Female 98.8
Sample D Female 90.6
Hippocampal formation
nTPM: 112.4
Samples: 4

Max nTPM: 125.8
Min nTPM: 103.6
Sample A Male 125.8
Sample B Male 103.6
Sample C Female 111.4
Sample D Female 108.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
68341752 Antisense, RP_041207_02_B04, Mouse strain C57BL/6J (56 days, male) 2.3
77371787 Antisense, RP_070116_01_C03, Mouse strain C57BL/6J (56 days, male) 1.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.