HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:49.2 nTPM
HPA:49.2 nTPM
GTEx:97.4 nTPM
FANTOM5:247.8 Scaled Tags Per Million
Pig:306.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004136
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.2
Sample id Sample description nTPM
Hippocampus
nTPM: 47.6
1898 Male, age 80, left hemisphere 49.2
2529 Female, age 94, left hemisphere 48.8
1855 Male, age 76, left hemisphere 48.0
2621 Female, age 67, right hemisphere 47.2
1911 Female, age 85, right hemisphere 46.2
2148 Female, age 91, left hemisphere 45.9
Dentate gyrus
nTPM: 49.2
2530 Female, age 94, left hemisphere 52.5
2010 Male, age 76, both hemispheres 51.6
1927 Female, age 91, both hemispheres 49.1
2528 Male, age 74, both hemispheres 48.5
2531 Female, age 67, both hemispheres 47.3
2246 Female, age 85, both hemispheres 46.3
Entorhinal gyrus
nTPM: 48.9
2613 Female, age 94, left hemisphere 51.0
1787 Male, age 76, left hemisphere 49.8
1938 Female, age 85, left hemisphere 49.7
2764 Male, age 80, right hemisphere 48.7
2686 Male, age 75, right hemisphere 47.4
2117 Female, age 91, right hemisphere 47.1
Hippocampus, CA1
nTPM: 48.5
2749 Male, age 80, left hemisphere 51.3
2045 Male, age 76, both hemispheres 49.9
1873 Female, age 85, both hemispheres 47.8
2082 Female, age 91, right hemisphere 47.0
2527 Male, age 74, both hemispheres 46.7
Hippocampus, CA2
nTPM: 48.5
1892 Male, age 76, both hemispheres 51.0
2437 Female, age 94, left hemisphere 50.7
1963 Male, age 80, left hemisphere 50.6
2249 Male, age 74, both hemispheres 48.9
2113 Female, age 91, right hemisphere 46.6
1940 Female, age 85, left hemisphere 43.4
Hippocampus, CA3
nTPM: 48.1
1867 Male, age 76, both hemispheres 53.3
2620 Female, age 94, left hemisphere 48.5
2137 Male, age 80, left hemisphere 47.7
1891 Female, age 85, both hemispheres 47.1
2436 Male, age 74, both hemispheres 46.6
2861 Female, age 67, both hemispheres 45.3
Parahippocampal cortex
nTPM: 46.8
2018 Male, age 76, both hemispheres 52.8
2250 Female, age 67, right hemisphere 47.6
1990 Female, age 91, right hemisphere 46.8
2692 Male, age 74, both hemispheres 46.8
2532 Female, age 72, left hemisphere 46.5
1850 Male, age 80, both hemispheres 46.3
2622 Female, age 67, right hemisphere 46.0
2245 Female, age 91, both hemispheres 45.7
1933 Female, age 85, both hemispheres 45.5
2693 Female, age 94, both hemispheres 43.8
Perirhinal gyrus
nTPM: 47.7
1847 Female, age 91, left hemisphere 50.2
1841 Female, age 85, right hemisphere 49.2
2848 Male, age 76, right hemisphere 47.4
1794 Male, age 80, right hemisphere 46.7
2521 Female, age 94, right hemisphere 45.0
Subiculum
nTPM: 48.1
1977 Female, age 85, both hemispheres 50.8
2438 Female, age 94, left hemisphere 49.4
2042 Male, age 76, both hemispheres 48.5
1901 Male, age 80, both hemispheres 46.9
2729 Female, age 91, right hemisphere 46.8
2619 Male, age 74, both hemispheres 46.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 97.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 97.4
Samples: 197

Max nTPM: 227.0
Min nTPM: 43.2
Std nTPM: 28.7
Median nTPM: 92.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 227.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 201.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 186.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 183.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 172.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 171.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 167.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 163.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 161.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 161.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 160.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 247.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 247.8
FF:10169-103B7 60 years, female 415.4
FF:10153-102I9 76 years, female 80.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 306.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 306.3
Samples: 4

Max nTPM: 396.9
Min nTPM: 236.4
Sample A Female 396.9
Sample B Female 276.7
Sample C Male 315.3
Sample D Male 236.4
Entorhinal cortex
nTPM: 246.6
Samples: 4

Max nTPM: 306.0
Min nTPM: 185.4
Sample A Female 224.4
Sample B Female 306.0
Sample C Male 270.7
Sample D Male 185.4
Subiculum
nTPM: 261.0
Samples: 4

Max nTPM: 367.0
Min nTPM: 198.9
Sample A Female 367.0
Sample B Female 245.3
Sample C Male 198.9
Sample D Male 232.6
Ventral hippocampus
nTPM: 256.5
Samples: 4

Max nTPM: 276.2
Min nTPM: 225.6
Sample A Female 253.2
Sample B Female 225.6
Sample C Male 276.2
Sample D Male 271.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.