HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:38.5 nTPM
HPA:38.5 nTPM
GTEx:39.7 nTPM
FANTOM5:17.1 Scaled Tags Per Million
Pig:17.2 nTPM
Mouse:37.2 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020259
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.5
Sample id Sample description nTPM
Hippocampus
nTPM: 37.1
2529 Female, age 94, left hemisphere 40.3
2148 Female, age 91, left hemisphere 38.1
2621 Female, age 67, right hemisphere 37.8
1898 Male, age 80, left hemisphere 37.6
1911 Female, age 85, right hemisphere 35.0
1855 Male, age 76, left hemisphere 33.6
Dentate gyrus
nTPM: 36.0
2531 Female, age 67, both hemispheres 39.3
2530 Female, age 94, left hemisphere 38.7
2528 Male, age 74, both hemispheres 36.5
1927 Female, age 91, both hemispheres 36.3
2010 Male, age 76, both hemispheres 33.5
2246 Female, age 85, both hemispheres 31.5
Entorhinal gyrus
nTPM: 38.5
2613 Female, age 94, left hemisphere 40.5
2764 Male, age 80, right hemisphere 39.8
2686 Male, age 75, right hemisphere 39.5
1787 Male, age 76, left hemisphere 37.3
2117 Female, age 91, right hemisphere 37.0
1938 Female, age 85, left hemisphere 36.7
Hippocampus, CA1
nTPM: 35.7
2749 Male, age 80, left hemisphere 40.4
2082 Female, age 91, right hemisphere 36.5
2527 Male, age 74, both hemispheres 34.8
1873 Female, age 85, both hemispheres 33.4
2045 Male, age 76, both hemispheres 33.3
Hippocampus, CA2
nTPM: 36.0
1963 Male, age 80, left hemisphere 43.4
2113 Female, age 91, right hemisphere 36.6
2437 Female, age 94, left hemisphere 36.2
1892 Male, age 76, both hemispheres 34.7
1940 Female, age 85, left hemisphere 32.9
2249 Male, age 74, both hemispheres 32.3
Hippocampus, CA3
nTPM: 37.2
2861 Female, age 67, both hemispheres 42.1
2137 Male, age 80, left hemisphere 40.8
2620 Female, age 94, left hemisphere 39.5
1867 Male, age 76, both hemispheres 35.0
1891 Female, age 85, both hemispheres 33.5
2436 Male, age 74, both hemispheres 32.1
Parahippocampal cortex
nTPM: 35.1
2622 Female, age 67, right hemisphere 38.4
2245 Female, age 91, both hemispheres 36.9
1933 Female, age 85, both hemispheres 35.1
1990 Female, age 91, right hemisphere 35.0
2018 Male, age 76, both hemispheres 34.8
2692 Male, age 74, both hemispheres 34.8
2250 Female, age 67, right hemisphere 34.5
1850 Male, age 80, both hemispheres 34.0
2532 Female, age 72, left hemisphere 33.9
2693 Female, age 94, both hemispheres 33.2
Perirhinal gyrus
nTPM: 35.8
1794 Male, age 80, right hemisphere 37.5
1847 Female, age 91, left hemisphere 37.0
1841 Female, age 85, right hemisphere 35.3
2521 Female, age 94, right hemisphere 34.8
2848 Male, age 76, right hemisphere 34.3
Subiculum
nTPM: 34.3
1977 Female, age 85, both hemispheres 36.5
2619 Male, age 74, both hemispheres 36.5
2729 Female, age 91, right hemisphere 35.5
1901 Male, age 80, both hemispheres 34.9
2042 Male, age 76, both hemispheres 32.4
2438 Female, age 94, left hemisphere 30.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.7
Samples: 197

Max nTPM: 93.6
Min nTPM: 11.3
Std nTPM: 11.3
Median nTPM: 38.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 93.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 75.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 69.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 68.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 68.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 63.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 62.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 61.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 57.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 57.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 57.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.1
FF:10153-102I9 76 years, female 25.9
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 16.8
Min nTPM: 9.9
Sample A Female 16.8
Sample B Female 14.8
Sample C Male 13.2
Sample D Male 9.9
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 21.0
Min nTPM: 15.2
Sample A Female 16.0
Sample B Female 16.7
Sample C Male 21.0
Sample D Male 15.2
Subiculum
nTPM: 16.3
Samples: 4

Max nTPM: 21.9
Min nTPM: 12.3
Sample A Female 21.9
Sample B Female 16.0
Sample C Male 14.9
Sample D Male 12.3
Ventral hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 20.9
Min nTPM: 13.0
Sample A Female 13.7
Sample B Female 13.0
Sample C Male 20.9
Sample D Male 15.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.2
Samples: 4

Max nTPM: 37.8
Min nTPM: 36.5
Sample A Male 36.5
Sample B Male 37.8
Sample C Female 37.6
Sample D Female 37.0
Hippocampal formation
nTPM: 36.2
Samples: 4

Max nTPM: 38.8
Min nTPM: 34.4
Sample A Male 36.5
Sample B Male 34.4
Sample C Female 38.8
Sample D Female 34.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69095969 Antisense, RP_050324_02_F06, Mouse strain C57BL/6J (56 days, male) 2.0

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