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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:414.1 nTPM
FANTOM5:684.7 Scaled Tags Per Million
Pig:94.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA040520
Glial cells High
Neuronal cells Medium


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 414.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 414.1
Samples: 246

Max nTPM: 1190.2
Min nTPM: 139.3
Std nTPM: 179.0
Median nTPM: 366.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1190.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1027.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1007.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 991.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 870.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 861.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 859.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 842.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 820.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 808.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 786.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 761.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 742.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 740.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 727.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 722.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 716.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 710.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 698.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 694.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 691.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 647.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 635.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 634.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 633.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 630.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 629.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 627.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 624.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 623.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 619.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 615.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 613.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 609.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 606.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 605.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 602.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 596.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 595.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 584.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 581.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 571.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 571.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 565.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 565.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 561.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 560.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 560.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 553.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 551.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 548.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 543.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 534.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 530.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 528.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 525.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 520.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 518.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 516.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 512.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 511.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 511.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 509.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 506.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 504.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 504.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 503.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 501.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 500.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 498.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 497.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 490.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 486.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 485.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 481.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 475.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 474.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 473.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 470.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 470.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 467.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 466.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 466.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 465.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 454.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 451.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 448.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 446.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 444.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 438.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 437.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 436.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 435.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 429.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 427.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 427.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 425.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 423.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 422.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 419.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 416.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 414.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 412.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 412.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 409.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 409.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 402.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 400.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 400.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 395.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 390.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 390.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 390.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 388.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 388.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 387.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 385.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 383.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 381.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 380.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 378.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 372.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 369.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 364.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 361.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 360.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 359.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 358.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 356.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 355.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 355.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 354.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 352.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 349.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 347.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 346.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 346.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 345.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 345.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 343.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 343.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 342.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 341.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 341.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 341.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 340.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 339.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 337.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 337.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 335.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 335.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 333.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 333.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 332.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 332.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 332.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 330.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 328.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 327.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 325.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 325.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 324.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 320.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 319.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 316.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 315.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 314.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 314.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 312.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 311.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 310.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 310.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 310.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 306.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 301.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 301.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 298.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 298.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 297.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 296.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 293.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 293.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 289.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 288.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 287.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 284.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 282.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 281.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 280.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 280.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 276.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 275.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 270.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 269.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 266.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 264.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 264.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 263.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 261.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 260.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 260.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 257.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 255.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 254.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 252.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 250.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 249.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 247.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 242.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 241.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 240.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 238.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 236.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 235.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 234.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 230.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 230.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 227.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 226.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 225.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 223.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 223.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 220.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 219.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 218.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 217.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 216.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 212.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 212.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 208.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 202.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 197.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 195.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 193.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 191.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 187.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 184.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 175.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 173.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 163.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 157.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 152.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 143.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 142.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 140.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 139.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 684.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 684.7
FF:10164-103B2 76 years, female 684.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 94.4
Pig sample Sample description nTPM
Caudate
nTPM: 94.4
Samples: 4

Max nTPM: 115.1
Min nTPM: 79.7
Sample A Female 88.2
Sample B Female 79.7
Sample C Male 115.1
Sample D Male 94.4

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