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S100A13
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  • S100A13
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:326.7 nTPM
FANTOM5:38.7 Scaled Tags Per Million
Pig:15.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA019592Antibody CAB025494
Glial cells MediumMedium
Neuronal cells HighMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 326.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 326.7
Samples: 246

Max nTPM: 1201.5
Min nTPM: 37.2
Std nTPM: 169.9
Median nTPM: 287.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1201.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1000.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 883.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 858.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 759.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 725.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 721.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 701.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 700.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 698.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 687.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 665.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 662.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 637.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 620.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 618.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 610.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 602.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 602.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 599.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 587.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 584.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 574.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 571.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 555.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 550.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 548.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 545.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 545.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 543.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 543.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 535.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 530.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 529.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 515.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 510.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 503.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 502.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 501.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 496.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 489.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 481.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 479.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 475.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 470.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 466.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 463.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 450.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 446.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 441.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 437.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 435.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 431.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 428.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 426.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 420.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 418.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 417.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 415.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 401.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 396.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 394.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 390.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 388.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 386.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 385.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 381.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 379.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 378.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 378.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 377.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 364.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 363.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 361.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 361.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 361.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 360.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 357.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 353.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 352.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 348.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 346.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 342.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 341.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 337.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 336.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 336.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 334.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 332.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 330.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 329.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 328.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 326.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 322.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 319.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 319.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 319.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 318.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 317.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 317.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 316.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 314.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 312.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 311.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 308.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 307.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 307.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 306.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 306.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 305.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 304.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 304.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 303.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 303.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 302.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 300.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 300.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 298.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 297.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 297.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 289.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 287.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 287.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 286.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 285.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 284.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 283.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 283.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 283.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 282.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 277.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 275.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 273.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 271.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 271.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 270.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 267.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 266.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 263.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 262.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 262.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 262.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 262.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 262.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 260.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 260.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 259.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 256.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 255.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 254.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 249.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 249.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 247.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 247.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 244.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 244.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 244.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 243.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 242.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 240.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 239.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 238.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 237.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 235.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 234.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 233.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 229.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 228.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 227.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 225.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 225.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 223.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 218.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 217.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 217.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 216.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 215.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 215.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 211.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 210.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 209.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 209.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 207.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 206.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 204.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 202.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 202.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 200.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 199.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 197.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 197.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 196.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 195.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 195.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 195.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 193.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 190.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 189.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 185.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 185.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 183.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 183.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 182.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 180.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 178.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 178.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 178.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 177.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 175.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 173.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 169.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 169.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 168.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 168.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 165.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 164.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 162.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 161.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 159.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 155.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 154.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 153.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 153.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 151.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 151.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 150.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 148.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 147.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 146.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 142.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 141.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 136.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 135.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 132.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 132.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 131.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 129.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 129.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 127.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 127.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 123.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 123.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 121.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 115.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 109.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 37.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 38.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 38.7
FF:10164-103B2 76 years, female 38.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 15.4
Pig sample Sample description nTPM
Caudate
nTPM: 15.5
Samples: 4

Max nTPM: 17.9
Min nTPM: 11.5
Sample A Female 14.7
Sample B Female 17.9
Sample C Male 17.7
Sample D Male 11.5

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