HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:49.6 nTPM
HPA:49.6 nTPM
GTEx:39.3 nTPM
FANTOM5:22.5 Scaled Tags Per Million
Pig:51.6 nTPM
Mouse:63.8 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027820Antibody HPA045837
Glial cells Not detectedLow
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.6
Sample id Sample description nTPM
Hippocampus
nTPM: 48.8
1855 Male, age 76, left hemisphere 51.6
1911 Female, age 85, right hemisphere 51.1
2529 Female, age 94, left hemisphere 49.3
2148 Female, age 91, left hemisphere 47.9
1898 Male, age 80, left hemisphere 47.7
2621 Female, age 67, right hemisphere 45.4
Dentate gyrus
nTPM: 47.0
2010 Male, age 76, both hemispheres 51.4
1927 Female, age 91, both hemispheres 48.5
2246 Female, age 85, both hemispheres 46.7
2528 Male, age 74, both hemispheres 45.5
2530 Female, age 94, left hemisphere 45.5
2531 Female, age 67, both hemispheres 44.5
Entorhinal gyrus
nTPM: 45.9
1938 Female, age 85, left hemisphere 49.0
2117 Female, age 91, right hemisphere 47.5
2764 Male, age 80, right hemisphere 46.3
1787 Male, age 76, left hemisphere 46.2
2686 Male, age 75, right hemisphere 44.5
2613 Female, age 94, left hemisphere 42.1
Hippocampus, CA1
nTPM: 48.6
2045 Male, age 76, both hemispheres 50.3
2749 Male, age 80, left hemisphere 50.1
2527 Male, age 74, both hemispheres 48.3
1873 Female, age 85, both hemispheres 47.9
2082 Female, age 91, right hemisphere 46.3
Hippocampus, CA2
nTPM: 46.7
1940 Female, age 85, left hemisphere 50.1
2249 Male, age 74, both hemispheres 47.8
1892 Male, age 76, both hemispheres 47.1
2113 Female, age 91, right hemisphere 45.6
1963 Male, age 80, left hemisphere 45.1
2437 Female, age 94, left hemisphere 44.9
Hippocampus, CA3
nTPM: 49.6
2137 Male, age 80, left hemisphere 53.8
1867 Male, age 76, both hemispheres 51.3
2436 Male, age 74, both hemispheres 49.8
2861 Female, age 67, both hemispheres 49.2
1891 Female, age 85, both hemispheres 48.6
2620 Female, age 94, left hemisphere 44.8
Parahippocampal cortex
nTPM: 47.6
2018 Male, age 76, both hemispheres 50.8
1850 Male, age 80, both hemispheres 49.9
1933 Female, age 85, both hemispheres 49.1
2532 Female, age 72, left hemisphere 47.9
2692 Male, age 74, both hemispheres 47.3
2693 Female, age 94, both hemispheres 47.2
2245 Female, age 91, both hemispheres 47.1
2250 Female, age 67, right hemisphere 46.5
1990 Female, age 91, right hemisphere 45.9
2622 Female, age 67, right hemisphere 43.8
Perirhinal gyrus
nTPM: 49.3
1847 Female, age 91, left hemisphere 51.6
1841 Female, age 85, right hemisphere 50.2
1794 Male, age 80, right hemisphere 48.4
2521 Female, age 94, right hemisphere 48.1
2848 Male, age 76, right hemisphere 48.0
Subiculum
nTPM: 48.5
2042 Male, age 76, both hemispheres 53.0
2438 Female, age 94, left hemisphere 49.3
1901 Male, age 80, both hemispheres 48.7
2729 Female, age 91, right hemisphere 48.6
2619 Male, age 74, both hemispheres 46.3
1977 Female, age 85, both hemispheres 45.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.3
Samples: 197

Max nTPM: 160.8
Min nTPM: 24.0
Std nTPM: 11.3
Median nTPM: 37.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 160.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 65.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 62.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 60.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 60.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 57.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 56.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 55.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 55.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 54.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 53.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.5
FF:10153-102I9 76 years, female 23.0
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.1
Samples: 4

Max nTPM: 57.1
Min nTPM: 41.4
Sample A Female 57.1
Sample B Female 48.0
Sample C Male 53.9
Sample D Male 41.4
Entorhinal cortex
nTPM: 43.3
Samples: 4

Max nTPM: 51.4
Min nTPM: 31.4
Sample A Female 41.4
Sample B Female 49.0
Sample C Male 51.4
Sample D Male 31.4
Subiculum
nTPM: 51.6
Samples: 4

Max nTPM: 63.9
Min nTPM: 45.4
Sample A Female 63.9
Sample B Female 45.4
Sample C Male 46.0
Sample D Male 50.9
Ventral hippocampus
nTPM: 45.1
Samples: 4

Max nTPM: 47.0
Min nTPM: 42.6
Sample A Female 47.0
Sample B Female 46.0
Sample C Male 44.8
Sample D Male 42.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.4
Samples: 4

Max nTPM: 63.1
Min nTPM: 54.3
Sample A Male 59.0
Sample B Male 61.0
Sample C Female 63.1
Sample D Female 54.3
Hippocampal formation
nTPM: 63.8
Samples: 4

Max nTPM: 72.1
Min nTPM: 57.5
Sample A Male 72.1
Sample B Male 63.1
Sample C Female 57.5
Sample D Female 62.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
2491 Antisense, RP_040507_01_C08, Mouse strain C57BL/6J (56 days, male) 1.1
2492 Antisense, RP_040507_01_C08, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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