HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:21.1 nTPM
HPA:21.1 nTPM
GTEx:23.0 nTPM
FANTOM5:24.4 Scaled Tags Per Million
Pig:16.8 nTPM
Mouse:12.8 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037751Antibody HPA037752
Glial cells HighLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.1
Sample id Sample description nTPM
Hippocampus
nTPM: 15.4
2529 Female, age 94, left hemisphere 17.6
1911 Female, age 85, right hemisphere 17.2
2148 Female, age 91, left hemisphere 17.0
2621 Female, age 67, right hemisphere 15.8
1855 Male, age 76, left hemisphere 13.1
1898 Male, age 80, left hemisphere 11.9
Dentate gyrus
nTPM: 15.6
2530 Female, age 94, left hemisphere 18.0
2010 Male, age 76, both hemispheres 17.3
2531 Female, age 67, both hemispheres 16.4
2528 Male, age 74, both hemispheres 14.3
1927 Female, age 91, both hemispheres 13.7
2246 Female, age 85, both hemispheres 13.7
Entorhinal gyrus
nTPM: 18.0
2117 Female, age 91, right hemisphere 27.0
2764 Male, age 80, right hemisphere 21.1
2613 Female, age 94, left hemisphere 18.2
2686 Male, age 75, right hemisphere 15.8
1787 Male, age 76, left hemisphere 13.1
1938 Female, age 85, left hemisphere 12.5
Hippocampus, CA1
nTPM: 14.8
2045 Male, age 76, both hemispheres 16.7
2749 Male, age 80, left hemisphere 16.6
2082 Female, age 91, right hemisphere 15.6
2527 Male, age 74, both hemispheres 12.8
1873 Female, age 85, both hemispheres 12.1
Hippocampus, CA2
nTPM: 16.6
2437 Female, age 94, left hemisphere 20.1
1963 Male, age 80, left hemisphere 20.0
1940 Female, age 85, left hemisphere 18.6
2113 Female, age 91, right hemisphere 16.6
1892 Male, age 76, both hemispheres 12.3
2249 Male, age 74, both hemispheres 12.2
Hippocampus, CA3
nTPM: 16.1
1891 Female, age 85, both hemispheres 21.2
1867 Male, age 76, both hemispheres 19.8
2137 Male, age 80, left hemisphere 18.0
2620 Female, age 94, left hemisphere 14.1
2436 Male, age 74, both hemispheres 12.2
2861 Female, age 67, both hemispheres 11.1
Parahippocampal cortex
nTPM: 14.9
2532 Female, age 72, left hemisphere 20.2
1990 Female, age 91, right hemisphere 17.6
2692 Male, age 74, both hemispheres 17.4
2018 Male, age 76, both hemispheres 17.2
2245 Female, age 91, both hemispheres 14.8
1933 Female, age 85, both hemispheres 13.6
2693 Female, age 94, both hemispheres 13.4
1850 Male, age 80, both hemispheres 12.6
2622 Female, age 67, right hemisphere 12.6
2250 Female, age 67, right hemisphere 10.0
Perirhinal gyrus
nTPM: 11.3
2521 Female, age 94, right hemisphere 13.3
2848 Male, age 76, right hemisphere 11.2
1794 Male, age 80, right hemisphere 11.0
1847 Female, age 91, left hemisphere 10.6
1841 Female, age 85, right hemisphere 10.2
Subiculum
nTPM: 21.1
2042 Male, age 76, both hemispheres 26.5
1901 Male, age 80, both hemispheres 24.9
2438 Female, age 94, left hemisphere 23.3
1977 Female, age 85, both hemispheres 17.6
2729 Female, age 91, right hemisphere 17.2
2619 Male, age 74, both hemispheres 17.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.0
Samples: 197

Max nTPM: 76.1
Min nTPM: 6.0
Std nTPM: 10.5
Median nTPM: 20.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 76.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 67.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 58.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 56.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 47.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 47.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 46.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 46.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 44.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 43.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 42.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.4
FF:10153-102I9 76 years, female 36.4
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.8
Samples: 4

Max nTPM: 21.8
Min nTPM: 13.7
Sample A Female 21.8
Sample B Female 15.7
Sample C Male 15.9
Sample D Male 13.7
Entorhinal cortex
nTPM: 11.7
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.5
Sample A Female 12.3
Sample B Female 11.5
Sample C Male 12.5
Sample D Male 10.5
Subiculum
nTPM: 12.8
Samples: 4

Max nTPM: 15.3
Min nTPM: 11.3
Sample A Female 15.3
Sample B Female 12.6
Sample C Male 11.3
Sample D Male 12.0
Ventral hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 19.0
Min nTPM: 11.1
Sample A Female 15.7
Sample B Female 11.1
Sample C Male 17.3
Sample D Male 19.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 12.6
Min nTPM: 7.6
Sample A Male 12.6
Sample B Male 12.2
Sample C Female 10.5
Sample D Female 7.6
Hippocampal formation
nTPM: 12.8
Samples: 4

Max nTPM: 16.4
Min nTPM: 10.2
Sample A Male 10.2
Sample B Male 12.7
Sample C Female 16.4
Sample D Female 12.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
678692 Antisense, RP_040914_02_D12, Mouse strain C57BL/6J (56 days, male) 2.0

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