HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:38.8 nTPM
HPA:38.8 nTPM
GTEx:31.2 nTPM
FANTOM5:0.6 Scaled Tags Per Million
Pig:17.1 nTPM
Mouse:11.4 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045641Antibody HPA062711
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.8
Sample id Sample description nTPM
Hippocampus
nTPM: 38.8
1855 Male, age 76, left hemisphere 43.8
2148 Female, age 91, left hemisphere 41.0
2621 Female, age 67, right hemisphere 39.7
1898 Male, age 80, left hemisphere 38.1
1911 Female, age 85, right hemisphere 37.6
2529 Female, age 94, left hemisphere 32.5
Dentate gyrus
nTPM: 38.2
1927 Female, age 91, both hemispheres 40.9
2531 Female, age 67, both hemispheres 39.9
2246 Female, age 85, both hemispheres 38.2
2010 Male, age 76, both hemispheres 37.6
2528 Male, age 74, both hemispheres 36.4
2530 Female, age 94, left hemisphere 36.4
Entorhinal gyrus
nTPM: 35.2
2613 Female, age 94, left hemisphere 41.1
2764 Male, age 80, right hemisphere 35.9
1938 Female, age 85, left hemisphere 34.9
1787 Male, age 76, left hemisphere 34.7
2686 Male, age 75, right hemisphere 34.6
2117 Female, age 91, right hemisphere 30.1
Hippocampus, CA1
nTPM: 38.8
1873 Female, age 85, both hemispheres 42.7
2749 Male, age 80, left hemisphere 41.9
2082 Female, age 91, right hemisphere 38.0
2045 Male, age 76, both hemispheres 36.9
2527 Male, age 74, both hemispheres 34.4
Hippocampus, CA2
nTPM: 38.7
1963 Male, age 80, left hemisphere 46.8
1892 Male, age 76, both hemispheres 45.5
1940 Female, age 85, left hemisphere 37.1
2113 Female, age 91, right hemisphere 36.1
2437 Female, age 94, left hemisphere 35.5
2249 Male, age 74, both hemispheres 31.4
Hippocampus, CA3
nTPM: 38.3
2861 Female, age 67, both hemispheres 49.2
2137 Male, age 80, left hemisphere 40.4
2620 Female, age 94, left hemisphere 38.4
1867 Male, age 76, both hemispheres 36.4
1891 Female, age 85, both hemispheres 34.3
2436 Male, age 74, both hemispheres 31.4
Parahippocampal cortex
nTPM: 34.5
2622 Female, age 67, right hemisphere 37.7
1933 Female, age 85, both hemispheres 36.7
2693 Female, age 94, both hemispheres 35.8
2245 Female, age 91, both hemispheres 35.0
2532 Female, age 72, left hemisphere 34.5
1850 Male, age 80, both hemispheres 34.2
2250 Female, age 67, right hemisphere 34.2
2018 Male, age 76, both hemispheres 32.5
2692 Male, age 74, both hemispheres 32.2
1990 Female, age 91, right hemisphere 31.7
Perirhinal gyrus
nTPM: 35.8
2521 Female, age 94, right hemisphere 37.7
1841 Female, age 85, right hemisphere 36.4
1794 Male, age 80, right hemisphere 35.2
2848 Male, age 76, right hemisphere 34.9
1847 Female, age 91, left hemisphere 34.6
Subiculum
nTPM: 31.6
2729 Female, age 91, right hemisphere 35.9
1977 Female, age 85, both hemispheres 34.9
1901 Male, age 80, both hemispheres 31.3
2619 Male, age 74, both hemispheres 31.1
2042 Male, age 76, both hemispheres 29.6
2438 Female, age 94, left hemisphere 26.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.2
Samples: 197

Max nTPM: 52.3
Min nTPM: 6.9
Std nTPM: 8.5
Median nTPM: 30.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 52.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 51.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 51.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 51.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 50.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 50.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 48.3
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 46.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 46.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 45.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 45.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.6
FF:10169-103B7 60 years, female 1.0
FF:10153-102I9 76 years, female 0.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 16.2
Min nTPM: 10.6
Sample A Female 16.2
Sample B Female 14.6
Sample C Male 13.2
Sample D Male 10.6
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 19.6
Min nTPM: 15.1
Sample A Female 17.7
Sample B Female 15.1
Sample C Male 19.6
Sample D Male 16.2
Subiculum
nTPM: 16.1
Samples: 4

Max nTPM: 19.7
Min nTPM: 13.4
Sample A Female 19.7
Sample B Female 14.4
Sample C Male 16.7
Sample D Male 13.4
Ventral hippocampus
nTPM: 14.9
Samples: 4

Max nTPM: 19.6
Min nTPM: 11.9
Sample A Female 13.6
Sample B Female 11.9
Sample C Male 19.6
Sample D Male 14.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.4
Samples: 4

Max nTPM: 14.3
Min nTPM: 10.1
Sample A Male 10.3
Sample B Male 11.0
Sample C Female 10.1
Sample D Female 14.3
Hippocampal formation
nTPM: 9.7
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.4
Sample A Male 8.4
Sample B Male 11.1
Sample C Female 10.5
Sample D Female 8.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69448722 Antisense, RP_050419_02_G10, Mouse strain C57BL/6J (56 days, male) 0.8
74881514 Antisense, RP_060315_04_C02, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

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