HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.4 nTPM
HPA:41.4 nTPM
GTEx:31.0 nTPM
FANTOM5:56.8 Scaled Tags Per Million
Pig:44.5 nTPM
Mouse:22.7 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055427
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.4
Sample id Sample description nTPM
Hippocampus
nTPM: 31.4
2529 Female, age 94, left hemisphere 37.3
2621 Female, age 67, right hemisphere 33.7
1855 Male, age 76, left hemisphere 30.2
1898 Male, age 80, left hemisphere 29.8
1911 Female, age 85, right hemisphere 28.9
2148 Female, age 91, left hemisphere 28.6
Dentate gyrus
nTPM: 31.0
2010 Male, age 76, both hemispheres 34.5
2530 Female, age 94, left hemisphere 34.2
2246 Female, age 85, both hemispheres 32.9
2528 Male, age 74, both hemispheres 29.7
1927 Female, age 91, both hemispheres 27.6
2531 Female, age 67, both hemispheres 27.0
Entorhinal gyrus
nTPM: 33.7
2117 Female, age 91, right hemisphere 35.5
1787 Male, age 76, left hemisphere 35.3
2764 Male, age 80, right hemisphere 35.0
1938 Female, age 85, left hemisphere 34.6
2686 Male, age 75, right hemisphere 31.6
2613 Female, age 94, left hemisphere 30.2
Hippocampus, CA1
nTPM: 31.5
2527 Male, age 74, both hemispheres 33.9
2082 Female, age 91, right hemisphere 32.7
1873 Female, age 85, both hemispheres 31.5
2045 Male, age 76, both hemispheres 29.8
2749 Male, age 80, left hemisphere 29.4
Hippocampus, CA2
nTPM: 32.4
1940 Female, age 85, left hemisphere 33.9
2113 Female, age 91, right hemisphere 33.8
2249 Male, age 74, both hemispheres 32.7
2437 Female, age 94, left hemisphere 32.5
1892 Male, age 76, both hemispheres 31.4
1963 Male, age 80, left hemisphere 29.9
Hippocampus, CA3
nTPM: 29.1
2436 Male, age 74, both hemispheres 35.6
1867 Male, age 76, both hemispheres 29.8
1891 Female, age 85, both hemispheres 29.1
2861 Female, age 67, both hemispheres 27.9
2620 Female, age 94, left hemisphere 26.9
2137 Male, age 80, left hemisphere 25.5
Parahippocampal cortex
nTPM: 37.8
2250 Female, age 67, right hemisphere 41.8
2532 Female, age 72, left hemisphere 41.2
2622 Female, age 67, right hemisphere 40.1
1933 Female, age 85, both hemispheres 39.5
1850 Male, age 80, both hemispheres 38.1
2693 Female, age 94, both hemispheres 38.1
2245 Female, age 91, both hemispheres 36.8
2018 Male, age 76, both hemispheres 36.0
1990 Female, age 91, right hemisphere 34.6
2692 Male, age 74, both hemispheres 32.1
Perirhinal gyrus
nTPM: 41.4
1841 Female, age 85, right hemisphere 48.1
1794 Male, age 80, right hemisphere 42.6
2848 Male, age 76, right hemisphere 39.2
2521 Female, age 94, right hemisphere 39.1
1847 Female, age 91, left hemisphere 37.8
Subiculum
nTPM: 32.2
2438 Female, age 94, left hemisphere 35.0
2619 Male, age 74, both hemispheres 33.9
1977 Female, age 85, both hemispheres 32.6
2042 Male, age 76, both hemispheres 32.5
1901 Male, age 80, both hemispheres 29.9
2729 Female, age 91, right hemisphere 29.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.0
Samples: 197

Max nTPM: 64.1
Min nTPM: 15.6
Std nTPM: 7.3
Median nTPM: 29.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 64.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 57.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 54.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 52.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 49.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 48.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 47.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 47.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 45.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 44.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 44.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.8
FF:10153-102I9 76 years, female 64.4
FF:10169-103B7 60 years, female 49.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 37.1
Min nTPM: 22.1
Sample A Female 37.1
Sample B Female 29.7
Sample C Male 32.5
Sample D Male 22.1
Entorhinal cortex
nTPM: 43.9
Samples: 4

Max nTPM: 51.0
Min nTPM: 40.4
Sample A Female 51.0
Sample B Female 40.5
Sample C Male 43.8
Sample D Male 40.4
Subiculum
nTPM: 44.5
Samples: 4

Max nTPM: 54.5
Min nTPM: 41.0
Sample A Female 54.5
Sample B Female 41.2
Sample C Male 41.1
Sample D Male 41.0
Ventral hippocampus
nTPM: 35.5
Samples: 4

Max nTPM: 43.2
Min nTPM: 28.6
Sample A Female 37.0
Sample B Female 28.6
Sample C Male 43.2
Sample D Male 33.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 26.2
Min nTPM: 18.8
Sample A Male 20.8
Sample B Male 25.1
Sample C Female 18.8
Sample D Female 26.2
Hippocampal formation
nTPM: 14.1
Samples: 4

Max nTPM: 16.3
Min nTPM: 12.6
Sample A Male 16.3
Sample B Male 14.0
Sample C Female 12.6
Sample D Female 13.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
583564 Antisense, RP_040831_02_A08, Mouse strain C57BL/6J (56 days, male) 1.5

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