COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: High
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.7 nTPM
HPA:23.3 nTPM
GTEx:39.7 nTPM
FANTOM5:67.6 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA039701Antibody HPA040035
Endothelial cells HighMedium
Glandular cells HighHigh
Peripheral nerve/ganglion HighMedium




COLON - HPA RNA-seqi
Average nTPM 23.3
overview
Male, age 54 		Colon sample 67
nTPM: 23
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 25.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 22.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 22.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 24.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 20.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 22.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 21.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 24.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 21.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 25.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 22.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 25.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 39.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 39.7
Samples: 373

Max nTPM: 65.9
Min nTPM: 21.2
Std nTPM: 8.0
Median nTPM: 39.1
GTEX-17HGU-2626-SM-79OKN 50-59 years, male 65.9
GTEX-1HSMO-2526-SM-A9SKP 60-69 years, male 63.4
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 62.6
GTEX-183WM-2526-SM-731BP 70-79 years, female 61.3
GTEX-1GZ4H-1326-SM-7P8TE 50-59 years, female 57.8
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 57.7
GTEX-14AS3-1026-SM-5TDD7 40-49 years, female 57.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 57.3
GTEX-1LSNM-1426-SM-E6CIH 50-59 years, male 57.2
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 56.6
GTEX-1JMQK-2326-SM-ARZN4 60-69 years, male 56.5
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Colon - Transverse
Average nTPM: 30.8
Samples: 406

Max nTPM: 62.1
Min nTPM: 14.4
Std nTPM: 8.1
Median nTPM: 29.5
GTEX-OXRO-0726-SM-E9U4C 60-69 years, female 62.1
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 56.4
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 55.5
GTEX-18D9B-2526-SM-718BN 60-69 years, male 54.5
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 54.3
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 53.8
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 50.8
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 50.0
GTEX-OXRN-2026-SM-E6CHK 50-59 years, male 50.0
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 49.9
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 49.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 67.6
FF:10014-101C5 62,83,84 years, mixed 67.6

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.