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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:121.1 nTPM
FANTOM5:364.0 Scaled Tags Per Million
Pig:163.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA043640Antibody HPA046280Antibody CAB005417Antibody CAB012406
Glial cells Not detectedLowLowNot detected
Neuronal cells Not detectedLow-Low









CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 121.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 121.1
Samples: 246

Max nTPM: 308.0
Min nTPM: 62.9
Std nTPM: 30.5
Median nTPM: 117.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 308.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 290.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 213.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 204.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 191.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 187.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 187.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 186.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 184.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 182.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 180.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 179.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 172.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 172.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 172.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 171.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 167.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 162.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 162.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 161.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 161.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 161.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 158.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 157.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 155.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 155.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 155.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 154.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 153.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 151.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 151.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 151.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 150.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 150.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 149.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 149.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 149.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 148.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 147.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 145.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 145.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 144.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 144.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 143.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 141.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 140.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 140.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 139.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 139.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 138.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 138.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 138.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 138.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 136.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 136.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 136.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 135.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 135.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 134.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 134.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 133.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 132.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 131.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 130.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 130.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 130.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 130.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 130.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 130.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 129.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 129.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 129.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 129.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 129.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 128.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 127.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 126.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 126.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 126.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 126.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 126.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 125.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 125.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 125.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 125.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 124.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 124.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 124.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 124.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 123.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 123.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 123.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 123.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 123.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 123.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 123.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 122.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 122.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 122.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 122.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 122.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 121.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 121.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 121.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 121.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 121.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 120.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 119.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 119.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 119.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 119.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 119.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 119.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 118.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 118.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 118.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 118.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 118.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 118.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 118.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 118.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 118.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 117.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 117.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 117.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 116.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 116.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 116.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 116.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 116.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 115.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 115.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 115.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 115.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 114.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 114.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 114.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 114.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 114.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 114.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 114.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 113.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 112.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 111.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 111.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 111.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 111.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 111.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 111.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 110.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 110.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 109.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 109.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 109.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 109.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 108.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 108.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 108.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 108.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 108.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 107.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 107.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 107.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 107.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 106.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 106.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 106.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 105.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 105.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 105.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 104.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 104.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 104.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 103.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 103.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 103.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 103.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 103.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 102.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 102.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 102.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 102.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 102.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 101.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 101.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 100.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 100.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 100.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 99.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 99.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 98.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 98.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 98.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 98.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 97.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 96.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 96.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 96.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 96.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 96.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 95.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 95.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 94.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 93.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 93.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 93.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 92.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 92.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 92.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 92.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 92.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 91.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 91.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 91.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 91.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 90.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 90.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 90.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 90.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 90.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 89.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 89.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 89.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 89.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 88.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 88.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 88.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 87.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 87.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 86.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 86.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 86.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 85.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 85.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 84.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 84.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 83.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 83.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 82.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 81.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 81.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 80.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 79.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 78.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 73.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 62.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 364.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 364.0
FF:10164-103B2 76 years, female 364.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 163.8
Pig sample Sample description nTPM
Caudate
nTPM: 163.8
Samples: 4

Max nTPM: 190.2
Min nTPM: 144.8
Sample A Female 144.8
Sample B Female 171.8
Sample C Male 190.2
Sample D Male 148.3

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