COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:6.5 nTPM
HPA:5.5 nTPM
GTEx:6.5 nTPM
FANTOM5:17.1 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 5.5
overview
Male, age 54 		Colon sample 67
nTPM: 5.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 5.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 3.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 4.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 3.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 5.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 6.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 4.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 6.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 6.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 6.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 6.5
Samples: 373

Max nTPM: 12.6
Min nTPM: 2.2
Std nTPM: 1.9
Median nTPM: 6.2
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 12.6
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 12.4
GTEX-1GF9X-1426-SM-7RHGX 40-49 years, female 12.3
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 11.6
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 11.6
GTEX-1QCLZ-2026-SM-EAZ4A 60-69 years, female 11.5
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 11.4
GTEX-1JMLX-2526-SM-CY8HX 50-59 years, male 11.3
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 11.2
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 11.2
GTEX-V955-1726-SM-4JBHF 60-69 years, male 10.9
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Colon - Transverse
Average nTPM: 5.6
Samples: 406

Max nTPM: 12.5
Min nTPM: 1.4
Std nTPM: 1.5
Median nTPM: 5.6
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 12.5
GTEX-1H1DE-1526-SM-ARL9B 20-29 years, male 10.1
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 9.7
GTEX-17GQL-1526-SM-7LTAC 60-69 years, male 9.2
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 9.1
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 9.1
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 9.0
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 9.0
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 8.8
GTEX-1L5NE-2026-SM-CXZKR 50-59 years, male 8.8
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 8.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 17.1
FF:10014-101C5 62,83,84 years, mixed 17.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.