HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:17.8 nTPM
HPA:17.8 nTPM
GTEx:16.3 nTPM
FANTOM5:52.3 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:21.5 nTPM
Allen mouse:8.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.8
Sample id Sample description nTPM
Hippocampus
nTPM: 16.0
2148 Female, age 91, left hemisphere 17.0
2621 Female, age 67, right hemisphere 17.0
1898 Male, age 80, left hemisphere 16.3
1855 Male, age 76, left hemisphere 15.8
2529 Female, age 94, left hemisphere 15.4
1911 Female, age 85, right hemisphere 14.7
Dentate gyrus
nTPM: 16.6
2531 Female, age 67, both hemispheres 17.8
1927 Female, age 91, both hemispheres 16.8
2530 Female, age 94, left hemisphere 16.6
2246 Female, age 85, both hemispheres 16.1
2010 Male, age 76, both hemispheres 16.0
2528 Male, age 74, both hemispheres 16.0
Entorhinal gyrus
nTPM: 17.8
2764 Male, age 80, right hemisphere 19.5
2613 Female, age 94, left hemisphere 18.4
1787 Male, age 76, left hemisphere 18.3
2686 Male, age 75, right hemisphere 17.5
1938 Female, age 85, left hemisphere 17.1
2117 Female, age 91, right hemisphere 16.1
Hippocampus, CA1
nTPM: 16.0
2749 Male, age 80, left hemisphere 17.0
2527 Male, age 74, both hemispheres 16.2
1873 Female, age 85, both hemispheres 15.8
2082 Female, age 91, right hemisphere 15.7
2045 Male, age 76, both hemispheres 15.5
Hippocampus, CA2
nTPM: 16.2
2437 Female, age 94, left hemisphere 17.0
1892 Male, age 76, both hemispheres 16.8
1940 Female, age 85, left hemisphere 16.5
1963 Male, age 80, left hemisphere 15.8
2113 Female, age 91, right hemisphere 15.6
2249 Male, age 74, both hemispheres 15.6
Hippocampus, CA3
nTPM: 17.2
2620 Female, age 94, left hemisphere 19.4
2861 Female, age 67, both hemispheres 18.6
2436 Male, age 74, both hemispheres 17.8
1891 Female, age 85, both hemispheres 16.2
2137 Male, age 80, left hemisphere 15.9
1867 Male, age 76, both hemispheres 15.3
Parahippocampal cortex
nTPM: 17.3
2622 Female, age 67, right hemisphere 19.5
1850 Male, age 80, both hemispheres 17.6
1990 Female, age 91, right hemisphere 17.4
2245 Female, age 91, both hemispheres 17.4
1933 Female, age 85, both hemispheres 17.3
2532 Female, age 72, left hemisphere 17.1
2692 Male, age 74, both hemispheres 17.0
2018 Male, age 76, both hemispheres 16.9
2250 Female, age 67, right hemisphere 16.4
2693 Female, age 94, both hemispheres 16.3
Perirhinal gyrus
nTPM: 17.4
2848 Male, age 76, right hemisphere 19.2
1794 Male, age 80, right hemisphere 17.6
1847 Female, age 91, left hemisphere 17.1
1841 Female, age 85, right hemisphere 16.8
2521 Female, age 94, right hemisphere 16.3
Subiculum
nTPM: 16.1
2619 Male, age 74, both hemispheres 17.6
1977 Female, age 85, both hemispheres 17.3
2438 Female, age 94, left hemisphere 16.1
2042 Male, age 76, both hemispheres 15.4
2729 Female, age 91, right hemisphere 15.4
1901 Male, age 80, both hemispheres 15.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.3
Samples: 197

Max nTPM: 22.8
Min nTPM: 9.9
Std nTPM: 2.5
Median nTPM: 16.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 22.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 22.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 22.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 21.8
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 21.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 21.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 21.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 20.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 20.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 20.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 20.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.3
FF:10169-103B7 60 years, female 55.4
FF:10153-102I9 76 years, female 49.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 15.3
Min nTPM: 9.6
Sample A Female 15.3
Sample B Female 11.4
Sample C Male 9.6
Sample D Male 9.9
Entorhinal cortex
nTPM: 10.8
Samples: 4

Max nTPM: 11.8
Min nTPM: 9.0
Sample A Female 11.8
Sample B Female 10.7
Sample C Male 11.7
Sample D Male 9.0
Subiculum
nTPM: 11.3
Samples: 4

Max nTPM: 15.1
Min nTPM: 9.5
Sample A Female 15.1
Sample B Female 10.4
Sample C Male 10.0
Sample D Male 9.5
Ventral hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 15.0
Min nTPM: 9.6
Sample A Female 11.5
Sample B Female 9.6
Sample C Male 15.0
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 21.3
Min nTPM: 19.0
Sample A Male 19.0
Sample B Male 21.3
Sample C Female 19.8
Sample D Female 19.6
Hippocampal formation
nTPM: 21.5
Samples: 4

Max nTPM: 23.8
Min nTPM: 18.7
Sample A Male 23.8
Sample B Male 22.5
Sample C Female 21.0
Sample D Female 18.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.7
227159 Antisense, RP_040604_01_G09, Mouse strain C57BL/6J (56 days, male) 14.2
68203484 Antisense, RP_041208_01_C04, Mouse strain C57BL/6J (56 days, male) 3.2

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